Methanosphaera sp. BMS: AW729_08660
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Entry
AW729_08660 CDS
T05504
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
metb
Methanosphaera sp. BMS
Pathway
metb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
metb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AW729_08660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
metb03021
]
AW729_08660
Enzymes [BR:
metb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AW729_08660
Transcription machinery [BR:
metb03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
AW729_08660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
USP7_ICP0_bdg
Motif
Other DBs
NCBI-ProteinID:
AWX33154
LinkDB
All DBs
Position
2344573..2347194
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AA seq
873 aa
AA seq
DB search
MKGIIKKISEIDFGLMSPETIRKMSVTKIVTPDTYDEDGYPIEAGLMDPRLGVIDPGLKC
RTCGSKGGDCQGHFGHINFARPVIHVGFADTIHKILRSTCRSCGCVLLSDTEKEKYKDKL
EERIANGEDISKILKQIHVAAKKEKCPHCEEEQVEIKIDKPISIVEGNYKLTASEVRERL
ENIPEDDYIYIGINKDVARPEWMVLTVLPVPPVTVRPSITLETGERSEDDLTHKLVDILR
INQRLKENMEAGAPQLIVEDLWELLQYHVTTYFDNEASGVPPARHRSGRPLKTLAQRLKG
KEGRFRSNLAGKRVNFSARTVISPDPNISINEVGVPEMIAKEITVPITVTKWNIDQMKEY
IKNGSNVHPGANYIIRPDGRKIRVYDETKEAAMENLEPGYIVERHIIDGDIVLFNRQPSL
HRMSMMAHEVRVLPYKTFRLHLCVCPPYNADFDGDEMNMHVFQTPEARAEANNIMKVQEH
ILSPRYGGPIIGAIHDHITGAYLLTHKDTVFEEDKALQIIKRAKMPLPEAKGEPWTGKEV
FSLLLPDRLNLVYKAEICRKCEECKYENCEYDAYVVISNGQLLQGVVDDKGYGSGSGKIL
DAIVKQFGPAEARYFLDHATKLAVFGGVMQRGFTTGTADEEIPKEAEERIAELLEESDQR
VERLIQTYEDGELEALPGRSLRETLEMKIMQVLGEARDNTGVIAERYFTTSNSAVIMALT
GARGSMLNLTQIATCVGQQAVRGGRINRGYIDRTLPHFHKGDVGAKASGFVNSSYKHGLD
PLEFFFHAMGGREGLVDTAIRTAQSGYMQRRLVNALHDLSVHEDGTVRDNNGVIVQFKYG
EDGINPAKSDYGKVADLDKLIEEMRLESNVAGK
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaggaataattaaaaagatatctgagatagactttggtttaatgtctcctgaaaca
atcaggaagatgtccgtaaccaagattgtaactccggatacatatgatgaagatggttat
ccaatagaagcgggacttatggatccaagacttggtgtaatcgatcctggactcaaatgt
cgcacatgcggttctaaaggtggagactgtcagggacactttggacatattaactttgca
agacccgttattcacgtaggatttgcagataccatacataagatattaagatctacctgt
cgcagctgcggttgtgtactcttaagcgataccgaaaaggaaaaatacaaggataagctt
gaagaaagaatagccaatggtgaagatatttccaaaatcttaaaacagattcacgtagcc
gctaagaaagaaaaatgtcctcattgtgaagaggaacaggtagaaataaaaattgacaaa
ccgatttctatcgttgaaggtaactacaaactaacggcaagtgaagtacgtgaaagattg
gaaaacatacctgaagatgattatatctacataggtatcaacaaggacgttgcaagacct
gaatggatggtattgactgttctgcctgtacctcctgtaacggtaagaccttcaattact
ttggagaccggtgaacgttctgaggatgacttaacccataagcttgtagacatattacgt
atcaatcagagattgaaggaaaatatggaagcgggagctccacagctgattgttgaggat
ttatgggaattgctccaatatcacgttacaacctactttgataatgaggcaagtggagtg
ccaccggcaagacacagatccggaagaccattgaaaacactggctcagcgtcttaaaggt
aaggaaggaaggttcagaagtaaccttgcaggtaaacgtgtaaacttctcagcacgtacg
gttatctcaccggatcctaacatcagtatcaatgaggttggtgttcctgagatgattgca
aaggaaattaccgtacctatcaccgtgacaaagtggaacatagaccagatgaaggaatac
attaaaaacggttcaaacgttcaccctggagccaactatataataaggccagatggacgt
aaaataagggtctatgacgaaaccaaagaggcagcaatggaaaacctggagcctggttac
atagtcgaaagacacatcatcgatggggacatagtactgtttaaccgtcagccatcactt
caccgtatgtcaatgatggctcacgaggtaagggtgcttccttacaaaacattcagatta
catctgtgtgtatgtccgccatacaatgcagacttcgacggagacgaaatgaacatgcac
gtattccagacacctgaagcacgtgccgaggcaaacaatatcatgaaggtacaggaacat
atcctatcacctcgttatggtggtccgattatcggtgctattcacgaccatattaccggt
gcatacctgcttacacataaggacacggtctttgaagaggataaggctcttcaaataata
aaaagggctaaaatgcctctgcctgaagctaagggcgaaccttggacaggtaaggaagta
ttcagtttacttcttccggacaggcttaaccttgtatataaggctgaaatctgtagaaaa
tgtgaagaatgtaaatatgaaaactgtgaatacgacgcttatgtagtaatcagtaacggt
caattattacagggagtagtggatgataagggatacggttccggtagtggaaaaatactc
gatgctatcgtgaaacaattcggtccggccgaagcaagatacttcctggatcatgctaca
aaactggctgtattcggtggtgtaatgcagagaggattcacaaccggtacggcggatgag
gaaattcctaaagaagctgaggaacgtattgcagagcttcttgaagaatccgaccagagg
gtagaacgtctaattcaaacatatgaagacggtgaacttgaagcattgcctggccgtagc
ttacgtgaaacacttgagatgaaaatcatgcaagtgctaggggaagctagggacaacact
ggggttatcgcagaacgttactttacaacctcaaacagtgcggttatcatggcacttacc
ggtgcaaggggttccatgttgaacctaactcagattgctacctgtgtaggacagcaggct
gttcgtggtggacgtattaacaggggttatatagatcgtacattacctcacttccacaag
ggggatgttggtgctaaggcaagtggatttgtaaacagcagttacaaacatggacttgat
ccattggaattcttcttccacgctatgggtggtcgtgaaggactggtggataccgctatt
cgtacagcacaaagtggttacatgcaaagacgtcttgtaaatgcattgcatgacttgagt
gtacatgaggatggtaccgtaagggacaacaatggtgtaatcgttcagttcaagtatggg
gaagatggaatcaacccggcaaaaagtgattatggaaaagttgctgatttagataagttg
attgaagaaatgagattagaatctaatgtagcaggtaaataa
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