Methanosphaera sp. BMS: AW729_08725
Help
Entry
AW729_08725 CDS
T05504
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
metb
Methanosphaera sp. BMS
Pathway
metb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
metb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AW729_08725 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
metb03021
]
AW729_08725 (tfb)
Transcription machinery [BR:
metb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
AW729_08725 (tfb)
Prokaryotic type
Archaeal type
TFB
AW729_08725 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Ribosomal_S27e
Sigma70_r4
Zn_ribbon_LysW
Zn_ribbon_tTFIIB
Lar_restr_allev
Cyclin_C
HTH_Tnp_ISL3
Zn_ribbon_5
Ribosomal_S27
Zn_ribbon_PaaD
UPF0181
Auto_anti-p27
Cas12f1-like_TNB
Zn_ribbon_4
A2L_zn_ribbon
DUF3797
Motif
Other DBs
NCBI-ProteinID:
AWX33646
LinkDB
All DBs
Position
complement(2358453..2359388)
Genome browser
AA seq
311 aa
AA seq
DB search
MKEDVAEMEKKETKCPECGSTRLINDHERGEVVCGTCGLVIDDNLVDMGPEWRAFDHEQR
DKRTRVGAPITYTIHDKGLSTMIDWRNKDIYGRDIPARNRAQWYRLRKWQRKIRISGATE
RNLAFALSELDRDSSRLGLPRSVRESASVVYRNAVENKLIRGRSIEGVVAASLYAACRRC
QVPRTLDEIAEVSRVSKKEVGRTYRFLTRELHIRLPPTSPIDYVPRFASELNLSGVVQSK
AIEIINEAMQNGLTSGRGPTGVAAAALYIASVILGERKTQRDVADIAGVTEVTIRNRYKE
LTEQLEMGVAL
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagacgttgcagagatggagaaaaaagagaccaaatgtcctgaatgtggatct
acacgtttgataaatgatcatgaacgtggagaagttgtatgtggtacatgtggacttgta
attgatgacaaccttgttgatatgggtcctgaatggagggcatttgaccatgaacagagg
gacaaacgtacaagagtaggtgctccaatcacatataccatacacgataaaggattgtct
accatgattgactggcgtaacaaggatatctatggaagagacatccctgcaagaaacagg
gcacagtggtacaggcttagaaaatggcagcgtaaaataagaataagcggggctactgaa
agaaaccttgcattcgcacttagtgaacttgaccgtgactcatccagactgggtcttcca
agatctgtacgtgagtcagcttctgtcgtgtacagaaatgccgtggaaaacaagcttatc
aggggaagaagtatagaaggagtagttgctgcttctttatatgccgcttgcagaagatgt
caagtgccaaggacacttgatgaaatagcagaagtttcacgtgtaagcaaaaaagaggta
ggtagaacttacagattccttactagagaattacacataaggcttccacctaccagccct
attgattatgttccaagatttgcaagtgaacttaacttatcaggtgtagttcaatccaag
gcaattgaaataatcaatgaggccatgcagaatggtttaaccagtggtcgtggtccgaca
ggtgtagcggctgcggcattgtacattgccagtgtaatactgggtgaaagaaaaacacaa
cgtgacgttgcagacatcgcgggtgttacagaagtgaccattagaaacaggtataaggaa
ctaaccgaacaattggaaatgggtgtggcattataa
DBGET
integrated database retrieval system
