Methanosphaera sp. BMS: AW729_09955
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Entry
AW729_09955 CDS
T05504
Name
(GenBank) hypothetical protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
metb
Methanosphaera sp. BMS
Brite
KEGG Orthology (KO) [BR:
metb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
metb03019
]
AW729_09955
Messenger RNA biogenesis [BR:
metb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AW729_09955
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Cas3_HD
HDOD
NAGidase
Motif
Other DBs
NCBI-ProteinID:
AWX33396
UniProt:
A0A2Z4LB03
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All DBs
Position
complement(2641573..2642466)
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AA seq
297 aa
AA seq
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MVKKEADYINKFNQSRDIISQFLITTKEIKKDKNNKPYVEFTLQDKTGSIKARMFTNNCK
KRYDNISVNNVYNIVGKIREFPVGSNKFNILIDDIRDSKKYNMDEFKRTAHKLDKHIEYF
FNIQKEIKNKDMVKLLSSIFTDEILREKFINAPAAKIHHHNYKGGLIVHTNEVISICLNL
CQVYEKLDKDLLITAAILHDIGKIETYDLDENNLITINRKGKLLDHIYIGANMVEQQCER
LDINEEVKTKLVHMILSHHGQKELGWGSTVDPLIPEALALHHADDISAKLTKSLDNQ
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaaaagaagcggattatataaataaatttaatcaatcaagagacataatctcc
caatttctaataacgacaaaggaaataaaaaaggacaagaacaacaagccctatgttgaa
ttcacattacaggacaaaacaggaagcattaaagcaagaatgtttacaaacaactgtaaa
aaaagatatgacaacataagcgtaaacaatgtatataacattgttggaaaaatacgtgaa
tttcccgtaggcagcaataaattcaacatattaatagatgacattagggattccaagaaa
tataacatggatgaatttaaaagaacagcccataaactggacaaacatatagagtacttc
ttcaacatacaaaaggaaataaaaaacaaggacatggtaaaactcttatcaagcatattt
accgatgaaatattgagagagaaattcattaacgcaccggcggccaaaatacatcatcac
aactataaaggcggactgattgtacataccaacgaagtaatatcaatatgcttaaatcta
tgccaggtctatgagaaacttgataaggatttattaattactgccgcaatccttcatgat
ataggaaaaatagaaacctatgatttggatgaaaacaatctgataacaataaacaggaaa
ggaaaactcttggatcatatttatataggagccaacatggtagaacagcaatgtgaacga
ctggacatcaatgaagaagtgaaaacgaaactggtacatatgattttaagccaccacgga
caaaaggaattgggatggggttcaacggtagacccattaatacctgaagcccttgcatta
catcatgcagatgacatcagtgccaaacttacaaaatcactggataaccagtag
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