Methanothermobacter sp. CaT2: MTCT_0032
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Entry
MTCT_0032 CDS
T04009
Name
(GenBank) H/ACA RNA-protein complex component
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
metc
Methanothermobacter sp. CaT2
Brite
KEGG Orthology (KO) [BR:
metc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
metc03016
]
MTCT_0032
Enzymes [BR:
metc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MTCT_0032
Transfer RNA biogenesis [BR:
metc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MTCT_0032
Prokaryotic type
MTCT_0032
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
BAM69281
LinkDB
All DBs
Position
16491..17459
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AA seq
322 aa
AA seq
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MAEFMELKESRTDPSYGCPPHERDIETHISHGVVNLDKPSGPTSHQVDAWVRDMLHAEKV
GHGGTLDPKVTGVLPLGINRATRVMQLLLEAPKEYVCLMRVHREVDEDRIREVLGEFQGK
IFQIPPLKSAVKRELRVRTIYDVSILEIDGKDVLFRIACEAGTYVRKYCHDVGEALGTGA
HMAELRRTRVGPFTEEGLVTLHDLKDAYQFWVEDGDEGFLRECILPMEFAVSHLPRAVIL
DSAVDAVCHGADLARGGIAGLDDNIRKGDTVAVMTLKGELVAVGEALMPSLDIVAADSGL
VIETEKVFMRPGTYPRMWRRSP
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcagaattcatggagttaaaggagtcacgcacggacccttcatatgggtgtcctcct
cacgagagggacattgagacccacatatcccacggcgttgttaaccttgataaaccctca
ggtcccacctcccaccaggtggatgcttgggttcgggacatgctacacgcagagaaggtg
gggcatgggggcacactggacccgaaggtcacaggtgttctgcccctgggtataaacagg
gcaacaagggtcatgcagcttctccttgaggcccccaaggaatacgtatgcctcatgagg
gttcacagggaggtggatgaggacaggataagggaggtgctaggggaattccagggaaag
atcttccagatacctcccctcaagtcagctgttaaaagggagctccgtgtaaggacaatc
tacgatgtgagtatactggaaattgatggtaaggatgttctcttcaggatagcctgtgag
gcagggacctacgtgaggaagtactgccatgatgtgggcgaggcccttggtacaggggcc
cacatggctgaactcagacgaacacgtgtgggacccttcacagaggagggcctggtaaca
ctccacgacctcaaggacgcctaccagttctgggttgaggatggggatgagggattcctg
cgtgaatgcatcctccccatggagtttgcagtatcccatctcccccgtgccgtcatcctt
gactctgcagttgatgcagtatgccatggcgctgaccttgcacgtggaggtatagctggc
ctggatgataacataaggaagggcgacacggttgcggtgatgaccctcaagggggaactt
gtggccgttggtgaggcgctgatgccgtcccttgatattgtggccgcagacagcggcctt
gtgattgagacagagaaggtcttcatgaggcccgggacctacccccggatgtggcgccgg
tccccatag
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