Methanothermobacter sp. CaT2: MTCT_0213
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Entry
MTCT_0213 CDS
T04009
Name
(GenBank) tRNA-splicing endonuclease alpha subunit
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
metc
Methanothermobacter sp. CaT2
Brite
KEGG Orthology (KO) [BR:
metc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
metc03016
]
MTCT_0213
Enzymes [BR:
metc01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
MTCT_0213
Transfer RNA biogenesis [BR:
metc03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
MTCT_0213
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
BAM69462
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Position
181316..181822
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AA seq
168 aa
AA seq
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MEGQLGDEVVTIKPDSDARRLHGKSHYGKLYEDRLQISLIEAAHLMERGKLTLKRDDDEV
SMEEFISLLAERGLYSKYLVYRDLRNRGYIVKTGFKYGAEFRLYERGGAPGRTHSAYLVR
VISENDTIHALDFSSYVRVAHGVNKKLLLAFLDDEEDVTYYLVDWIRP
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atggagggacagctgggagacgaggttgtaaccataaaaccggactcggatgcaaggagg
ctgcacggcaagagccactacggtaaactctatgaggacaggctgcagatttcactgatt
gaggcagcacacctcatggagaggggtaaactcacacttaagagggacgacgatgaggtc
tcaatggaggaattcatatcactcctggctgaaaggggcctctacagcaagtacctggtc
tacagggacctgaggaacaggggttacatcgtcaagacagggttcaagtacggtgcagag
ttcagactgtatgagaggggaggggccccgggcaggacacactcagcataccttgtgagg
gttatatcagagaatgacaccatccatgccctggacttttcaagttacgtcagggtggcc
catggggtgaacaagaagctcctcctggccttcctggacgatgaggaggatgtaacctac
taccttgttgactggataagaccataa
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