Methanothermobacter sp. CaT2: MTCT_0383
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Entry
MTCT_0383 CDS
T04009
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
metc
Methanothermobacter sp. CaT2
Pathway
metc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
metc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MTCT_0383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metc03400
]
MTCT_0383
DNA repair and recombination proteins [BR:
metc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MTCT_0383
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MTCT_0383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
nSTAND1
AAA_16
BCA_ABC_TP_C
AAA_23
AAA_22
AAA_21
DnaJ_CXXCXGXG
nSTAND3
AAA_33
ATPase
Radical_SAM
Viral_helicase1
Zn_ribbon_8
NACHT
cobW
Motif
Other DBs
NCBI-ProteinID:
BAM69632
UniProt:
T2GH45
LinkDB
All DBs
Position
341601..344483
Genome browser
AA seq
960 aa
AA seq
DB search
METLRIMSGKIVIKGAREHNLQNVDLELPRDKFIVITGISGSGKSSLAFDTIYAEGQRRY
VESLSAYARQFLGQMKKPEMDYIEGLSPAISIDQKTTRVNPRSTVGTITEIYDYLRLLFA
RIGKPHCYLCGREIEQQTSTQIVDRIMDDGEGERIIILAPVVRDRKGEHQRVFERLREQG
FVRVRVDGEIHDLEDEFDLDRNRKHSIEVVVDRLVVRMDTEFRKRLADSVETALQLGEGT
VRVLNHDTGEERIYSEHFACPDCGINFEEISPRMFSFNSPHGACPECNGLGSKLEIDPEL
VVPYPERSINEGAIVPWSKSGKKDNYYHQMLRAVAEHYGFSLDTPFRDLDEEHRRAILYG
TDEKIQFVFQRKNRTYRVNRRFEGVIPRMERIYMETKSNYMRTYIGRFMSNHACPVCGGS
RLRPESLSVTINGRSIHDVVEMSIREAHEFFDSLKLTEREEYIAREVLKEIRERLRFLID
VGLDYLTLSRSSGTLSGGEAQRIRLATQIGSGLVGVLYILDEPSIGLHQRDNRRLIETLK
RLRDLGNTLIVVEHDEETILSADHVVDIGPGAGEHGGCVVAEGTPEEIMEDPDSLTGAYL
SGRETIPLPEVRRRPSGRYLTVRGAAENNLREIDVRIPLGLFTCVTGVSGSGKSTLVNDI
LYRGVYERLNNKHMNAGRHTDIEGLQHIDKVVMIDQSPIGRTPRSNPATYTGVFTHIREL
FAQTPEARKRGYRPGRFSFNVKGGRCEACGGDGIIKIEMHFLADVYVPCEVCRGRRYNEE
TLEIRYRGRNIAEVLDMTVEEALEFFENIPQVRRKLQTLYDVGLGYIKLGQPATTLSGGE
AQRVKLAKELSRRSTGSTLYILDEPTTGLHFDDIKKLLNVLGRLVDAGNTAVVIEHNLDV
IKSADHIIDLGPEGGERGGLVVAEGTPEEVAASGTHTGRFLREVLADERSQKVPVGQDTG
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
ttggagacactgaggatcatgagtggtaaaatagtcattaagggtgccagggagcacaac
ctccagaacgtggaccttgaacttccacgggataaattcattgtcataaccggcataagc
gggtcaggaaagtcttcactggccttcgacacgatatacgctgaggggcagcgcaggtac
gtggagtccctctcagcctatgcaaggcagttcctgggacagatgaagaagccagagatg
gactacatagaggggctgtcaccggccatatccatcgaccagaagacgacccgggtcaac
cccagatcaacggtggggacaataacagagatctatgactacctgaggctgctatttgca
aggataggtaaaccccactgctacctctgcggcagggagatagagcagcagacctcgacc
cagatagtcgacaggataatggatgacggtgagggtgaacggataataatactcgcccct
gtggtcagggaccgcaagggggaacaccagcgtgtattcgagaggctcagggagcagggc
ttcgtgagggtcagggtcgacggtgagatacacgaccttgaagacgaattcgaccttgac
aggaacaggaagcactcaatagaggttgttgtggacaggctggttgtgaggatggacacg
gagttcagaaagaggcttgcggactccgttgaaacagccctccagctgggggaggggacc
gtcagggtcctcaaccatgacacaggcgaggagaggatctacagtgaacactttgcctgc
cctgactgcggcataaacttcgaggagatcagccccaggatgttctcatttaacagtccc
catggggcctgccctgagtgtaacggcctcggaagcaaacttgagatcgaccctgaactg
gtggtgccctaccctgaacgctcgataaacgagggcgccattgtgccctggagcaaatca
gggaagaaggacaactactaccaccagatgctgagggcggtggccgaacactacggcttc
agcctcgacacacccttcagggacctggacgaggaacaccggagggccatcctctacggg
accgatgagaagatacagttcgtatttcagagaaaaaacaggacctaccgggtgaacagg
cgcttcgagggtgtcataccccgcatggagaggatatacatggagaccaagtccaactac
atgaggacctacataggcaggttcatgagcaaccacgcctgtccggtatgcgggggaagc
aggctccggccggagagcctctcagtcaccatcaacggaagatcaatacatgacgttgtt
gagatgtcaatcagggaggcccatgaattcttcgactccctcaagctcaccgaacgcgag
gagtacatagccagggaggtcctcaaggagataagggagaggctgcgctttctgatcgac
gtgggcctggattacctcacactttcaaggtcatcaggaaccctctcagggggggaggcc
cagaggataaggctcgccacccagataggctccggccttgtgggggtcctctacatcctg
gatgagcccagcataggactccaccagcgggacaacaggaggctcatagagacactaaag
agactcagggaccttgggaacaccctcatagtggtggaacacgatgaggaaacaatactc
tcggcagaccacgttgtagacatcggaccgggcgcgggtgaacacgggggatgtgtggtt
gcagagggcacacctgaggagataatggaggacccggattcactcacaggggcctacctc
tcaggtagggaaacaatacccctacccgaggtcaggaggaggccatcaggaaggtacctg
actgtgaggggcgctgccgagaacaacctcagagaaatcgacgtcaggatacccctggga
ctgttcacctgtgtcacaggggtctcagggtcagggaagagcacactcgtcaatgacata
ctctacaggggtgtctatgagaggctcaacaacaagcacatgaacgccgggaggcacacc
gacattgagggcctccagcacatcgataaggtcgtgatgatagaccagtcacccataggt
agaacaccacgctcaaacccggcaacctacacaggggtgttcacccacatcagggagctc
tttgcccagacacctgaggccaggaagcgtggatacaggccgggcaggttcagcttcaac
gtcaagggcgggcgctgcgaggcctgcggcggggacggtataatcaagatagagatgcac
ttcctggcagacgtctacgtcccctgtgaggtgtgcaggggcaggagatacaatgaggag
acccttgagatacgctacaggggcaggaacatcgcggaggtccttgacatgaccgtggag
gaggccctcgaattctttgagaacataccccaggtgaggaggaagctccagacactctat
gacgtgggcctcggctacataaaactcgggcagcccgcaacgaccctctcgggtggtgag
gcccagagggtgaaacttgcgaaggagctcagcaggaggagtaccggcagtacactgtac
atccttgatgagccgaccacgggtctccacttcgatgacatcaagaagctcctcaatgtc
ctgggacggcttgtggatgccgggaacaccgccgttgtcatagaacacaaccttgatgtt
ataaagtccgcggaccacatcatagacctcggacccgagggtggtgagaggggtggcctc
gtcgttgcagagggaacaccagaggaggttgctgcatcaggtacacacaccggccgcttc
ctcagggaggtcctggcggatgaacgcagccagaaggtccctgtgggtcaggatacagga
tga
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