Methanothermobacter sp. CaT2: MTCT_0409
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Entry
MTCT_0409 CDS
T04009
Name
(GenBank) putative helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
metc
Methanothermobacter sp. CaT2
Pathway
metc03420
Nucleotide excision repair
metc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
metc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MTCT_0409
03430 Mismatch repair
MTCT_0409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metc03400
]
MTCT_0409
Enzymes [BR:
metc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MTCT_0409
DNA repair and recombination proteins [BR:
metc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MTCT_0409
MMR (mismatch excision repair)
Other MMR factors
MTCT_0409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
AAA_12
AAA_11
Cas_Cas4
RPN7
TPR_6
ResIII
Motif
Other DBs
NCBI-ProteinID:
BAM69658
UniProt:
T2GJB0
LinkDB
All DBs
Position
complement(383270..386023)
Genome browser
AA seq
917 aa
AA seq
DB search
MTGSLCRKGEACTEKQKMAVKKTEGPLVVVAGPGAGKTRVLVERVAYLVKRRGVSPENIL
VITFTEKAAGELKARLIKCVGLDAELMQISTIHSFCSKVLRDHPEEHELGGGFEILDEES
QLIFLRTVFYKIGLNRYMKMGEVHRAIEFFNRCTENCIEPGELIDALRRKYPDREKYQGI
AGCYARYLELLREQKKIDFPGLEKEVYLLLNSSERVLESVRKRYRYIMIDEYQDTSPIQE
LIFRRIAGRNSSICVVGDEDQSIYGFRGATPENFIRFREEYDAEVVTLEDNFRSRAGIVL
TADSFMRGERHYEKTIKPVRDGGTDVVILKSRDVNSEARNIVSLIKKLKATGKIPEYGYI
ALLFRSVRNHADKVLAELRREGIPYIVRGDGSFLKRYEVRSMLYFLAYVDPPDYGGKFSK
WNGWWNISRFRGEFLDLTGETLRALESLDRNCRLSDFTSRGELEEIGVHGEDAEKILGLN
RIRHEVGEGSLTVLKTFYRILEVTGYLRRLIEDGSDSSRAKIFNLAKLSSLIDRYEAIKP
GARIQDLLWYLYLLPSHLHHDEAALEDPASVKIMTVHQAKGLEFPVVFICSVINGRFPVK
RRKGRDIIPIPRELLLSPGEVPDEDRRLFYVAMTRAQDALIISTAPRINTRKVGISPFIT
DLREKCGIYECNCTSVSRCLTREWSEEPLRINFSALFTYEECPFRYMLIYHYGFVYPETF
MQRYGIILHRCLEELHLAMKNSEEINGALIRRIVERCWIPMGRDDDVKKRRLERDLLNYY
HDSRDHTEEVISVEEPFSIPDDDIIIEGRTDLIIRTRDGGLELVDFKAREHGGVERMALE
YQLRTYEYALRGRYRFDSLSAYAIKDSMRISFDSDPEFRVKERIAETVARIRDECFEPRK
NPFCSRCVFRTFCGVGD
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgacgggttcactctgcaggaagggcgaggcatgtacagagaagcagaagatggctgtt
aagaagacggaggggccgctggtagttgtggcgggacccggggccggaaagacccgtgta
ctcgttgaaagggtcgcatacctcgtcaagagaaggggcgtcagccccgagaacatactc
gtcataaccttcacagagaaggcagccggtgaactgaaggcgaggctcataaaatgtgtg
ggactggacgccgagctcatgcagatatccaccatacactcattctgcagcaaggtgctg
agggaccaccccgaggaacacgaactcgggggcggattcgagatcctcgacgaggaatcc
cagctcattttcctcagaacggtgttctataaaataggattgaaccgctacatgaagatg
ggtgaggttcacagggccatagaattcttcaacagatgcaccgaaaactgcattgaaccc
ggggagctcatagacgccctccggaggaaatatcctgacagggaaaaataccagggcatc
gccgggtgctatgcccgctaccttgaactcctcagggagcagaagaagatagacttccct
ggccttgaaaaggaggtctacctcctcctgaactccagcgagagggtactcgaatccgta
aggaagaggtacaggtacataatgatagacgagtaccaggatacaagccccatacaggag
ctgatattccggaggatagcagggaggaactccagcatctgcgtggtgggggatgaggac
cagagcatctacggcttcaggggagccacaccagagaacttcataaggttccgtgaagag
tacgacgcagaggtggtcaccctcgaggacaacttcaggtcccgggcagggatagtcctg
actgcagacagcttcatgaggggcgagagacactacgagaagaccatcaaaccggtaagg
gacggcgggaccgacgttgttatactgaagagcagggacgttaactcagaggccaggaac
atagtatcactaataaagaaactgaaagccaccggcaagatacctgaatacggatacatc
gcactcctcttcaggagcgtccgcaaccacgcagataaggtccttgcagagctcaggagg
gagggcataccctacatagtgcgtggagacggctccttcctcaaaaggtatgaggtgagg
agcatgctctacttcctcgcctacgtggacccaccggactatggaggaaaattcagtaag
tggaatggctggtggaacatatcaaggttcaggggcgaattcctggacctcaccggtgaa
accctccgggccctcgagtcccttgacaggaactgcagactctcggacttcacatcaagg
ggggaactcgaggaaatcggtgtacacggggaggatgcagagaagatcctgggcctcaac
aggatacgccatgaggttggggagggatcactgacagtgctcaagacattctacaggata
cttgaggttacagggtacctcaggaggctcatagaggatgggagtgacagtagcagggct
aaaatattcaacctcgcaaagttaagctcactgatagatagatacgaggccataaagccc
ggggcaaggatacaggacctgttatggtacctctacctcctacccagccacctccaccac
gacgaggcagccctggaggacccggcgtcggtgaagatcatgacggttcaccaggcaaag
ggcctcgagtttcctgttgtcttcatctgttcggtcataaacggcaggttccctgttaaa
aggcgtaaggggagggacatcatacccatacccagggaactcctgctatcacccggggag
gtacctgatgaggaccggcgactcttctacgttgcaatgaccagggcccaggacgcccta
atcatatcaacggccccccggatcaacaccagaaaggttggaatatcgcccttcatcaca
gacctcagggagaagtgcggcatctacgagtgtaactgcacatctgtcagcagatgcctc
acgagggagtggagtgaggagcccctcaggatcaacttctcggccctcttcacctacgag
gagtgccccttcaggtacatgctcatataccactacggcttcgtctaccccgaaaccttc
atgcagcgctatgggatcatactgcacaggtgccttgaggagctccacctggccatgaag
aactcggaggagataaacggggccctcataaggagaatcgttgaaaggtgctggataccc
atggggagagacgatgatgtcaaaaagaggcgccttgagagggacctcctcaactactac
cacgacagccgggaccacacagaggaggtcatatcggtggaggagcccttctccataccc
gatgatgacataataatcgaggggagaacagacctgataatcaggacccgggatggtgga
ctggaactcgttgacttcaaggcccgtgagcacggcggtgttgagaggatggcccttgag
taccagctccggacctatgaatacgcactaagggggaggtacaggttcgacagtctctcc
gcctatgctataaaggactccatgaggatatcctttgactccgaccctgaattcagggtt
aaggagaggatcgctgaaaccgtcgcaaggataagggatgaatgcttcgagccacggaag
aaccccttctgcagcaggtgcgtgttcaggaccttctgtggtgtgggggactga
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