Methanothermobacter sp. CaT2: MTCT_0440
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Entry
MTCT_0440 CDS
T04009
Name
(GenBank) putative helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
metc
Methanothermobacter sp. CaT2
Pathway
metc03420
Nucleotide excision repair
metc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
metc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MTCT_0440
03430 Mismatch repair
MTCT_0440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metc03400
]
MTCT_0440
Enzymes [BR:
metc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MTCT_0440
DNA repair and recombination proteins [BR:
metc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MTCT_0440
MMR (mismatch excision repair)
Other MMR factors
MTCT_0440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
HEAT_2
UvrD_C_2
AAA_30
AAA_11
AAA_12
AAA_22
Dna2
HEAT_PBS
AAA_16
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
BAM69689
UniProt:
T2GI34
LinkDB
All DBs
Position
complement(425288..428770)
Genome browser
AA seq
1160 aa
AA seq
DB search
MTGEIQLTDEQRRAVEHFTGPLLVVAGPGAGKTRIIVERVAHLMDERGAEPSSIVVITFT
RKAADELKERIIRRVGGRAEEMQISTIHSFCNRILRMYPDHHPLGSNFHVLDEENQLMFI
YEHREQLGLGNVQRERFPRIQAFFSECQENMVDLETLIEHHRRTGARKFEMTVAEAYQRY
LNLMDEAGLLDFAGMQWRVVRLLENDRKVLDDLRSRYRFLMVDEYQDTNPIQERFLELLA
GEECNLFAVGDEDQSIYGFRGSTPENFLGFEKKYGAEVVMLEKNFRSVPSIVDVTQRFMD
GYRKYPKDIRPVRDSENRVFILDNPTHQDEPSNVVEIIRALVDHGVIPHQGYVTLLFRSV
KHDAVEIMNELRREGIPFNVYGEGGFFDREEILYIMHLLHHTRRERRKIIRKLKYEHLEG
EFMDLTPGSVNLILDMDEEELRGLREYREFREAGFTDPDDIRKLVALNSLIDSDLGVLER
YYEILELTEYPHRLLERGDDESREKLYNLARFSSLIKDYERVSSEPCVEGLMEFIRMAMS
RGVKKYDQILLENPYSVNMMTMHRAKGLEFPVVIICSVFNGKLPRKVQGRSELELPEELR
RSTIRSDVMEEEEEEEEETEKEERRLFYVGMTRAQDMLIISATGNHRGRLGYSEFIEDLI
ESSRITSDRLGRIDPEDARIEIIKNSCQVEDIETREIFRISFTELNTYLTCPFRYMLLYE
YGFDVPSTRDQLYGMAVHECLRRINRRLMRGETVTDDYLQELASHALRDIEMSPDGFRAF
ISKLKRYLDEIRSRASEIVSAEKPFSILRDCFMITGQTDLIIRNLEGGLELVDFKSMSGS
GIHARDIELQLGVYRHALNLDFDGFLAYTFEDSEWHEIEPTEDMEGLLEDVAERIRREEF
PPRENELCSLCIFHSICTSLHGKLEAGSGEEDDLRRAFRALDPEDMDGYVEAIEGITGYL
RDSSDPEVRARAADYIGEAGDAVALDALREALSDPEEGVRIAARRAIERIKKAQRALKEN
YRTLICGRDFFRPKKIHTREGQFVVCRVCGHSKFLEDGVEEVVGIIGDEEYSWRQEDRLF
ISMWDEESKRARNADIDTLWVTDSDNMDYGWAINAVYQRLKNDVTRAKPLSEIPVTIRGD
PQISEEEIDILRRFGEIRIG
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgacaggggagattcagctcacagatgaacagcgcagagcagttgaacacttcacagga
cccctcctggtggtcgcaggacccggggcagggaagaccaggatcatagtggagagggtc
gcccacctcatggatgagaggggtgctgaaccatcatccatcgtcgtgataaccttcacc
aggaaggccgcggatgaactcaaggagagaataatcagacgtgtgggtggaagggcagag
gagatgcagatatccacaatacactccttctgcaaccgcatactccggatgtaccctgac
catcaccccctcggttcaaactttcatgtcctggatgaggaaaaccagctcatgttcata
tacgagcacagggaacagctgggactcggcaatgtacagagggagaggttcccccgcatc
caggccttcttcagcgagtgccaggagaacatggtcgacctcgagaccctgatagaacac
cacaggaggacaggggccaggaagttcgagatgaccgttgcagaggcctaccagaggtac
ctcaacctcatggacgaggccgggctgcttgacttcgcagggatgcagtggagggtcgtc
agactccttgaaaacgacaggaaggtcctggatgacctcaggtcaaggtacaggttcctc
atggtggacgagtaccaggacaccaaccccatacaggagaggttccttgaactccttgcg
ggagaggaatgtaacctgttcgctgttggagacgaggaccagagcatctacggtttcagg
ggatccacccctgagaacttcctgggcttcgagaagaagtacggtgccgaggtcgtcatg
cttgagaagaacttcagatcggtccccagcatagttgacgtcacccagcggttcatggat
ggttacaggaagtaccccaaggacataaggcccgtgagggactcagagaacagggtattc
atcctggacaaccccacacaccaggatgaaccctccaacgtggtcgagataataagggcc
ctcgttgaccatggtgtcatcccccaccagggttacgtgaccctcctcttcaggagcgtg
aagcacgatgcagtggagataatgaatgaactacgcagggagggcatacccttcaatgta
tacggtgagggaggcttctttgaccgggaggaaatactctacatcatgcacctcctccac
cacacccggagggagaggaggaagataatcagaaaactgaaatacgaacaccttgagggc
gagttcatggacctgacccccggcagcgtcaacctcatcctggacatggatgaggaggaa
ttaaggggtctcagggagtacagagaattcagggaggcgggattcacagaccccgatgac
atcaggaaactcgtggccctcaacagcctcatagacagcgacctcggagttcttgagagg
tactacgagatccttgaactgacagagtacccccacaggctccttgagaggggtgatgat
gagtcaagggagaaactctacaacctggcaaggttcagctcactcataaaggactacgag
cgcgtctcctcagagccctgcgtggagggcctaatggagttcataaggatggccatgtcc
cgcggggtcaagaagtacgaccagatactcctggagaacccctactctgtcaacatgatg
acaatgcacagggccaagggccttgagttcccggtggtcataatctgctcggtgttcaat
gggaaattacccaggaaggtccaggggaggagtgaactcgaattacctgaagaactccgg
aggagcacaataaggagtgatgtgatggaggaagaggaggaagaggaggaagagacggaa
aaggaggagaggcgcctcttctatgtggggatgacccgggcccaggacatgctcataatc
tcagcaaccgggaaccacaggggccggctgggttactcagagttcatagaggatctcatt
gaaagttcaaggataaccagtgacaggctcgggaggatagaccccgaggatgccaggata
gagatcataaagaacagctgccaggtggaggacattgagaccagggagatcttcaggatc
agcttcacagagctgaacacctacctcacatgccccttcaggtacatgctgctctatgag
tacggcttcgacgttccatcaaccagggaccagctctacggtatggcggtccacgagtgc
ctccggaggataaacaggcgcctgatgcgtggagagacggtgacagatgattaccttcag
gaactggcatcacatgccctcagagacatcgaaatgtcccctgatggattcagagccttc
atatcaaaactaaaacgctaccttgatgagataaggtcccgtgcatcagagatagtctct
gcagagaagcccttcagcatactgagggactgcttcatgataaccggtcagacagacctc
atcataaggaaccttgaaggcggcctggagctggtggacttcaagtcaatgtcagggtcg
ggtatacatgcaagggacatcgaactccagctgggagtctacaggcacgcactgaacctg
gacttcgacggcttcctcgcctacacctttgaggattcagaatggcatgaaatagaaccg
acagaggacatggaggggctccttgaggatgtggctgagaggataagacgtgaggaattc
cctccaagggagaacgagctctgcagtctctgcatattccactccatctgcacctccctc
catggaaaactggaggcaggatccggtgaggaagatgacctcagaagggcattcagggct
cttgaccctgaggacatggatggctatgtggaggccattgaggggatcacaggatacctc
agggactcatctgatccggaggtgagggccagggccgcagattacattggagaggcaggg
gatgctgtggcccttgatgcgctgagggaggccctcagtgaccctgaggaaggggtcagg
atagctgccaggagggccattgagaggataaaaaaggcccagagggccctgaaggagaat
tacaggacactcatatgtgggagggacttcttcaggccaaagaagatccacacccgggag
ggccagttcgtggtctgccgcgtctgcggccactcaaagttccttgaggatggagtggag
gaggttgtgggtataataggtgatgaggaatactcatggagacaggaagacaggttattc
atcagtatgtgggatgaggaatcgaaaagggcgagaaacgcagacatcgacaccctgtgg
gtcacagattccgataacatggactatgggtgggccataaacgctgtatatcagagactc
aaaaatgatgtgacaagggcaaaacccctcagcgagataccggtaacaatcaggggagac
cctcagatatctgaagaagaaatagatatcctcagaaggtttggggaaataagaattgga
tag
DBGET
integrated database retrieval system
