Methanothermobacter sp. CaT2: MTCT_0583
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Entry
MTCT_0583 CDS
T04009
Name
(GenBank) ATP-dependent RNA helicase
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
metc
Methanothermobacter sp. CaT2
Brite
KEGG Orthology (KO) [BR:
metc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
metc03019
]
MTCT_0583
Messenger RNA biogenesis [BR:
metc03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
MTCT_0583
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Paralog
GFIT
Motif
Pfam:
DUF5814
DEAD
Helicase_C
ResIII
DEXQc_Suv3
Motif
Other DBs
NCBI-ProteinID:
BAM69832
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All DBs
Position
complement(574167..576668)
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AA seq
833 aa
AA seq
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MIVLNRRKRSVDFIPAGNPKKILNTRRKPAYWGRLKIRSTEAGPRISRFTVEKGERETLR
KPSEALKILKKQAVILTGRDPEIEDLLSSYGISYRYARVCQHCLHEGYLTVVSSRSSTVH
AGQIICSRCVDELIKRELKFAGMDGSTFRNFRRLIRRGVSLDKILEMMSPRFDPLENHEL
TRYDTVTSESERTPRVPLDKLAVPEKFKRMLKREGNTVLRPVQVLAVDAGLLEGEDLMVV
SATASGKTLIAELAGIPRALGGEKFIYLTPLVALANQKYRDFRRRYSPLKLKTAIKVGMS
RIRARDELRIPETDVSKADIVVGTYEGMDYILRAGRSGILGDVGVVVIDEIHTLEDEERG
SRLKGMIKRIRRLFPDAQIIALSATVKNNLEVASEFGLRLVEYDRRPVPLERHLVFSRGE
EDKKNLILRLAEREFSTESEKGFRGQTIVFTNSRRKTRLIADYLTRRGVRAAAYHAGLSY
RERQRIERAFASQELAAIVTTAALAAGVDFPASQVVFETLLMGNRWLMPNEFAQMLGRAG
RPSYHDRGVVYVLAEVGMEFDGESEEAMALKLLESGPDPVDVNYTEEDVLENILADITSG
AIKSESEISPDPSWPLDPEGALDILESHGMIVRDGGLRATGYGVAVSKSFIGVTDAEYIR
GHLKGASRRPLDIALELEPFEGAYLSGRLHRALSRAAGARFSMNLMADSTLDILSDGDNL
VKLDSKLQEAVLNLQMDFLSCECRDRPFCGCIQRRLSEHIIAERISGRDPVEISRGLLSR
YQIQAYPGDIFSWLDTTVRALESIGRIASAFKRRRYLKECSGIVRAIEKGRGA
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgatagttttaaacagaaggaaaaggtccgttgattttataccggcaggaaacccaaag
aagatcctcaacacacgcagaaaacctgcttactggggcagactaaaaatcaggagcaca
gaagcaggaccgaggatatcaaggttcacggttgagaagggtgaacgtgaaaccctcagg
aaaccatcagaggcccttaagatactgaagaagcaggctgttattttaacaggacgtgac
ccggaaattgaggatctactctcatcctacggcatcagctacaggtatgcaagggtatgc
cagcactgcctccatgagggctatctgacagttgtaagttcaaggtcatcgacggtgcac
gcaggtcagatcatatgttcaagatgcgttgatgagctcataaagagggagcttaaattt
gcaggcatggacggatcaacattcagaaacttcaggagacttataaggcgtggtgtaagc
cttgataagatactggagatgatgtccccccgctttgaccctctcgagaaccatgaactg
acccgctatgacaccgtgacatcggaatcagagaggaccccccgcgtccctcttgataaa
cttgcagtaccggaaaaatttaagaggatgcttaaaagggagggtaacacggttctcaga
cctgtacaggtccttgcagtggatgcggggctcctggagggggaggacctcatggttgta
tctgcaactgctagcggaaagaccctcatagctgaacttgcaggcatacccagggccctg
ggtggtgaaaaattcatatacctcacgccactggtggcccttgcgaaccagaagtaccgg
gacttcagaaggaggtactcacccctaaaactcaaaacagccataaaggtcggtatgagt
cgcataagggcaagagatgaactcagaattccggagacagatgttagcaaagccgatata
gtggtcggaacctatgaggggatggactacatcctgagggcagggaggtctggcatcctg
ggggatgttggtgtggttgtcattgatgagatccacacccttgaggatgaggagaggggt
tcaaggctcaagggaatgataaagcgcataagaagactctttcctgatgcccagataatc
gcactctctgcaaccgtgaagaacaaccttgaggtggcctctgagttcgggcttagactg
gttgagtatgacaggagacctgtcccccttgagaggcacctcgtattctccaggggggag
gaggataagaagaacctcatactcaggcttgctgagagggagttctccacagaatcagaa
aaggggttccggggccagacgatagtcttcaccaattcccgtagaaagacgaggctcatt
gcagattatctgacacggaggggtgtgagggcggcggcctaccatgcaggtttatcctac
agggaaaggcagcgcatagaaagggccttcgcatcacaggaactcgcagcaatagttaca
actgccgcacttgccgctggagtggatttcccggcatcacaggtagtctttgaaacgctt
ctcatgggaaacaggtggctcatgcccaacgaatttgcacagatgcttggaagggcgggc
agaccctcctaccatgaccgtggcgttgtatatgtccttgcagaggttggaatggagttt
gatggcgagtcagaggaggccatggcgctcaaactccttgaaagcggacctgaccctgtg
gatgtaaattacacagaggaggatgtccttgagaacatcctggcagatataacctcaggt
gctataaaatctgaatctgaaatctctccagacccctcatggcccctggaccctgaagga
gcccttgacatccttgaatcccatggcatgatagtcagggatggtggactccgcgccacc
ggttatggggtggcagtctcaaagtcattcataggtgtgaccgatgccgagtacataagg
ggccaccttaagggggcttcaaggagacccctggacatagcactggagctcgaacccttt
gagggagcatatctatcagggaggctgcaccgtgccctcagcagggcagctggagcaagg
ttctcaatgaatctgatggcggattcaaccctcgacatactctcagatggggataacctt
gtgaagcttgacagtaaacttcaggaggctgttctcaatttgcagatggatttcctatcc
tgtgaatgcagggacagaccattctgtggatgcatacagcgcagattatctgaacatatt
atagcagagcgtatcagtggcagggacccggtggagataagcaggggacttctgtccaga
taccagattcaggcctacccaggggatatcttcagctggcttgataccaccgtcagggcc
cttgaatccatagggaggatcgccagcgcatttaaaaggaggaggtacctgaaggaatgt
tcagggattgtgcgggccattgaaaaaggtaggggggcatag
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