Methanothermobacter sp. CaT2: MTCT_0612
Help
Entry
MTCT_0612 CDS
T04009
Name
(GenBank) exosome complex exonuclease Rrp41
KO
K11600
exosome complex component RRP41
Organism
metc
Methanothermobacter sp. CaT2
Pathway
metc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
metc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTCT_0612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
metc03019
]
MTCT_0612
Messenger RNA biogenesis [BR:
metc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MTCT_0612
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
MTCT_0612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
BAM69861
LinkDB
All DBs
Position
complement(601929..602624)
Genome browser
AA seq
231 aa
AA seq
DB search
MKTSPSVREDGRAFDELRPLKIEAGILERADGSSYLEFGGNKILVAVYGPREAQIRKLQR
PDRAVIRCRYNMAPFSVEERKRPGPDRRSVEISKITAEALRPALILEKFPRSVIDVFIEV
LEAEGGTRCAGITAASVALADAGIPMRDMVVACAAGKVGDQVVLDLSEEEDKEGQADVPV
AILPRTREITLLQSDGNLTPEEFERALDLAVEGCLRIHEVQKEALRKRYGE
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
ttgaagacctcccccagcgtcagggaggatggaagggcgtttgatgaactcaggccctta
aaaatcgaggcagggatacttgaaagggcagatggttcatcttaccttgaatttggcggt
aacaagatactggtggctgtatacggtccaagggaggctcagataagaaagctgcagaga
cctgacagggccgtcataaggtgcaggtacaatatggcaccattctcagttgaggagcga
aagagaccgggccctgacaggcgttccgttgagatctccaagataactgcagaggccctc
agaccggcactgatacttgaaaaattccccagatcagtcatcgatgtattcatagaggtg
cttgaggctgagggaggtacgaggtgtgctggcataacagcggcttcagtcgcccttgca
gatgcaggaatacccatgagggacatggttgttgcctgtgcagcaggtaaggtcggtgat
caggtggtccttgacctctctgaggaggaggacaaggagggccaggcagacgtaccggtg
gcgatactcccgaggacacgtgaaatcacactgctccagagtgatggaaacctcacaccc
gaggaatttgaaagggcacttgaccttgcagtggagggatgcctccggatacatgaggtg
cagaaggaggccctcagaaagaggtatggtgaataa
DBGET
integrated database retrieval system
