Methanothermobacter sp. CaT2: MTCT_0952
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Entry
MTCT_0952 CDS
T04009
Name
(GenBank) DNA-directed RNA polymerase subunit beta''
KO
K03045
DNA-directed RNA polymerase subunit B" [EC:
2.7.7.6
]
Organism
metc
Methanothermobacter sp. CaT2
Pathway
metc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
metc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MTCT_0952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
metc03021
]
MTCT_0952
Enzymes [BR:
metc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MTCT_0952
Transcription machinery [BR:
metc03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MTCT_0952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
BAM70201
UniProt:
T2GI05
LinkDB
All DBs
Position
937589..939133
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AA seq
514 aa
AA seq
DB search
MKKSAWGLVDAFFDKYDLVDHHIHSYNDFVSNRIQEIIDTSEPIELEQGKYRVETGKVSI
EKPFIKEADGSKSKIYPTEARLRNLTYSAHMSLEMRLIKEGGPETEFEKVYIGELPVMLK
SEICHLHGLSRKELIEKGEDPADPGGYFIVNGSERSIVTMEEIAPNKIILERIGEEDENR
ARAIVTSIRSGFRARISLEYRKPRKTGVFLRISFPYVPGEIPLVILLRALGLATDQEIIT
SISDDFNYQMIAADDIQVSLEKLNLNKKEMEELDEEDRREYLIRSAIKYIGNRVAKGMTE
EYRIKRAEDVIDRYLLPHIGTGPEKRLEKATYLAEMTEMLLQVISGERKPHDKDHYTNKR
LRVSGDLMEDLLRVAFTSLSRDMSYQLERSLARGKEPSVKQAVRSDVLTENLKHAIATGN
WVGGRAGVSQLLDRTSYMGTLSHMRRVVSPLSRSQPHFEARDLHPTQFGKICPNETPEGP
NCGLVKNLALLAKISEGSDASEVEEIIKKMGVVN
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagtgcatggggattggtagacgcgttttttgataaatacgacctggtggac
caccacatccattcatataacgacttcgtaagtaaccgcatacaggaaataatagataca
agcgaacccattgaactggaacagggaaagtaccgggttgaaacaggaaaggtgagcata
gagaagcccttcatcaaggaggccgacggttcaaagagcaagatataccccacagaggcc
aggctgaggaacctcacatactcggcccatatgagcctggagatgaggctcatcaaggag
ggcgggcctgaaacagaatttgagaaggtgtacatcggtgaactgcctgtgatgctgaaa
tccgagatatgccacctccacggcctcagcaggaaggaactcattgagaagggtgaagac
cccgcagaccctggaggctacttcattgttaacggatcagagaggtccatcgtcacaatg
gaggagatagcccccaacaagataatccttgagagaatcggcgaagaggatgaaaacagg
gctcgggcgatagtaacatccataaggagcggattcagggccagaatatccctcgagtac
cgtaagccaaggaagaccggtgttttcctgcgtatatccttcccctacgttccaggggaa
atcccacttgtcatactactcagggcccttggacttgcaactgaccaggaaatcatcaca
agcatatcagacgacttcaactaccagatgatagctgcagacgatatacaggtctccctt
gaaaagctcaacctcaacaaaaaggagatggaggagcttgacgaagaggataggagggag
tacctcataaggagcgccataaagtacatcggtaaccgcgtcgccaaggggatgaccgag
gaataccgtataaaaagggctgaagacgtcatagatcgatacctcctgccccatatagga
acaggacccgaaaagaggctggagaaggcaacataccttgctgagatgaccgagatgcta
ctgcaggtcatatcaggggagcgcaaaccccacgacaaggaccactacacgaacaagagg
ctcagggtttcaggcgacctcatggaggacctcctgagggtggccttcacaagtcttagc
agggatatgagttaccagcttgagaggagccttgcgagggggaaggagccgtccgtcaag
caggctgtgagatccgatgtgctgacagagaacctcaaacacgccattgcaaccggtaac
tgggttggtggaagggcaggtgtgagccagctgctggaccggacaagttacatgggtaca
ctctcccacatgaggagagtcgtttcacccctcagcaggagccagccacacttcgaggca
agggaccttcacccgacccagttcggtaagatctgtcctaatgagacccctgagggtcca
aactgtggtcttgttaagaacctcgccctgctggcaaagatatccgagggctcagatgcc
agtgaggtggaggagatcataaaaaagatgggggttgtgaactaa
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