Methanothermobacter sp. CaT2: MTCT_1078
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Entry
MTCT_1078 CDS
T04009
Name
(GenBank) translation elongation factor EF-1 alpha subunit
KO
K03231
elongation factor 1-alpha
Organism
metc
Methanothermobacter sp. CaT2
Pathway
metc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
metc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MTCT_1078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
metc03019
]
MTCT_1078
03016 Transfer RNA biogenesis [BR:
metc03016
]
MTCT_1078
03012 Translation factors [BR:
metc03012
]
MTCT_1078
04131 Membrane trafficking [BR:
metc04131
]
MTCT_1078
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
metc04147
]
MTCT_1078
Messenger RNA biogenesis [BR:
metc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
MTCT_1078
Transfer RNA biogenesis [BR:
metc03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
MTCT_1078
Translation factors [BR:
metc03012
]
Eukaryotic type
Elongation factors
MTCT_1078
Membrane trafficking [BR:
metc04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
MTCT_1078
Exosome [BR:
metc04147
]
Exosomal proteins
Proteins found in most exosomes
MTCT_1078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D2
GTP_EFTU_D3
ATP_bind_1
MMR_HSR1
GTP-eEF1A_C
SLFN_AlbA_2
EF-G_D2
Motif
Other DBs
NCBI-ProteinID:
BAM70326
UniProt:
T2GID4
LinkDB
All DBs
Position
1071871..1073460
Genome browser
AA seq
529 aa
AA seq
DB search
MIEDLRSFTSPGERRNIEFKKALSARYHLKMDRKKGLISQMKYRMERGNGRAVYLLGVED
SGEPVGLPADKLDESVEVLRTLSSEIGAVVEEVNLHEGTEGMVAEVIISRKTKTAREHLL
VGVAGHVDHGKSTLLGTLTTGTPDDGSGKTRIFLDVQKHEIERGLSADLSFAIYGFRNGS
VMRLKNPLDRKEKSRLMDEADRVISFVDTVGHEPWLRTTIRGIVGQRLDYGLLTVAADEG
PTHITREHLGIMIAMELPVIVVLTKCDMATDENRRSVREKISELLKLVGRIPFHVKSRDA
AAGIAGKMNQHIVPIIETSSVTGEGLEILDELFLNLRVRRDVNGDEEPFLMYIDKIYTIR
GVGTVVSGTIQQGLVRKGDTLLLGPLKTGKFREVTVKSIEMHHYRIGCAEPGHIVGISIS
GASPDEIERGMILAHPDYDPEAVREFEAEVAILVHPTTIKAGYESVTHIETIAETTVLEP
LDSDFMSAGDRGRVRMRFKYRPHHVREGQKIIFREGRSKGIGSVTRILG
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagacctcagatcattcacatcccctggcgagagaaggaacatagaattcaag
aaggccctctcagccaggtatcacctcaagatggaccgtaagaagggcctcatatcccag
atgaagtaccgtatggagcggggtaacggtagggcagtgtacctgctgggtgtggaggac
agcggtgaaccggtcggcctccctgctgataaactggatgagtcagttgaggtcctcaga
accctcagcagtgagataggtgctgttgtggaggaggttaacctccatgagggtacagag
ggcatggtggcggaggtcataatctcaaggaagacgaagacagcgagggagcacctcctc
gtgggggtcgccggccacgtggaccacggtaagagcacactcctcgggaccctcacaaca
ggcacacctgatgatgggagcggtaagaccaggatattccttgatgtgcagaagcatgaa
atagagaggggtctatcggctgatctatccttcgccatctacggcttcaggaacggcagt
gttatgaggctcaagaacccccttgacaggaaggagaaatcacgcctcatggacgaggcc
gacagggtcatatccttcgttgacaccgtcggccatgagccctggcttcgaacaaccata
agggggattgtgggtcagaggctcgactacggactcctcacagtggcagccgatgagggg
cctacacacataacaagggagcacctcggtataatgatcgcaatggagctcccggtaatc
gtggtcctcacaaagtgtgatatggccacagatgagaacaggagaagtgtgagggagaag
atatctgaactgcttaaactggttggcaggatccccttccatgttaagagccgggacgct
gcagccgggatagccggtaagatgaaccagcacatagtccccataatcgagacctcctcg
gttacaggggagggtcttgaaatccttgatgaactcttcctcaatctcagggtccgtcgc
gatgttaacggggatgaagagccattcctcatgtacatagacaagatatacaccatcaga
ggcgttggtaccgttgtcagcgggacaatccagcagggacttgtcagaaagggtgacacc
ctcctcctggggcccctaaagacagggaaattccgggaggtcaccgtcaaatcaatagag
atgcaccactacaggataggctgtgcagaaccaggccacatcgtcggcatatccatatcc
ggggcctcccctgacgagatagagaggggtatgatactggcacaccctgactatgacccc
gaggctgtgagggaattcgaggcagaggttgccatactggtgcatccgacaaccataaag
gctggttatgagagtgtgacccacattgaaaccatagccgagacaaccgttcttgagccc
cttgactctgatttcatgtctgcaggtgacaggggtagggtgaggatgaggttcaagtac
aggccccaccatgtgagggagggtcagaagataatcttccgtgagggaaggagcaagggc
ataggttctgtgacaaggatcctgggataa
DBGET
integrated database retrieval system
