KEGG   Methanothermobacter sp. CaT2: MTCT_1198
Entry
MTCT_1198         CDS       T04009                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
metc  Methanothermobacter sp. CaT2
Pathway
metc02024  Quorum sensing
metc03060  Protein export
metc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:metc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    MTCT_1198
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    MTCT_1198
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    MTCT_1198
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:metc02044]
    MTCT_1198
Enzymes [BR:metc01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     MTCT_1198
Secretion system [BR:metc02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   MTCT_1198
  Eukaryotic Sec-SRP protein
   MTCT_1198
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_18 AAA_17 AAA_16 AAA_28 CbiA MobB AAA_30 nSTAND3 AAA_33 ResIII Arf ATP_bind_1 MeaB DO-GTPase2 NTPase_1 RNA_helicase Zeta_toxin 6PF2K APS_kinase YqeC LpxK MipZ AAA_22 nSTAND_NTPase7 Glyco_transf_4 AAA_5 G-alpha AAA_7 MMR_HSR1 AAA AAA_31 KTI12 Thymidylate_kin
Other DBs
NCBI-ProteinID: BAM70446
LinkDB
Position
1174167..1175459
AA seq 430 aa
MKKLAGMTIVDEEVVREVIKDIQRALIQSDVNIKLVFNLSKSIEERALNEEPPKGITPKE
HIISIVYDEMVKLLGEKSHELVIDDKPYRILFLGLQGSGKTTTIGKLARYLRKKGFTVGV
VCTDTWRPAALEQLEQYTEGQDVSIYGDPQNRDALDLAEKGLARFQKKDVIIFDTAGRHK
EEKDLLREMEELSAIVEPHEAILVIDGTIGQQAREQALAFRKATDIGSIIVTKLDGSAKG
GGALSAVAEIGAPIKFIGTGERIDDLEVFDPERFISRLLGMGDLRSLLEKVEEVSEEEIA
EESLDAILSGKFTLRDMRVQFEMMGKMGPLQQVMSMLPGAGKLPKDASRMTEETIRKYLI
IMDSMTEEELEKPDIIKHSRIRRIARGSGTRNEDVKELLKYYRVTKKAMKGLGRRKMGGP
MGQLMRQFMR
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgaaaaagctggcagggatgacaattgttgatgaggaggtcgtcagggaggtcataaag
gatatacagagggccctgatccagtccgatgtcaacataaaacttgtattcaacctgtca
aagtcaattgaggaacgggcactcaacgaggaaccccctaaggggataacgccaaaggag
cacatcataagcatagtgtacgatgagatggtcaaactcctgggtgagaagagccatgaa
cttgtcatagatgataaaccgtaccgcatactcttccttggactccagggtagcggtaaa
acaacaaccataggtaaacttgcaaggtacctccgcaagaagggtttcactgttggggtg
gtctgtacagacacctggcgccctgcggcccttgagcagctggaacagtataccgaggga
caggacgtgagcatatacggcgacccccagaacagggacgccctggaccttgcagagaag
ggacttgcccggttccagaagaaggacgttatcatattcgatacggccggaagacacaag
gaggagaaggacctcctcagggagatggaggaactttcagccattgtggagccccatgaa
gccatacttgtaatcgacgggaccataggccagcaggcaagggaacaggccctcgcattc
agaaaagccacagatataggttcaataattgtgaccaagctcgatggttcagccaagggt
ggtggggccctctcggccgttgcagagataggtgctcccataaagttcataggtaccggt
gagaggatagatgacctggaggtcttcgatcccgaaaggttcatatcacgtctcctcggt
atgggggacctcagaagtctcctcgagaaggttgaagaggtttcagaggaggagattgca
gaggaatccctcgacgcaatactctcaggtaagttcaccctcagggatatgagggtgcag
tttgagatgatgggtaagatggggcccctccagcaggttatgagtatgctgcctggtgcc
gggaaactcccaaaggacgccagcaggatgaccgaggagaccatacggaagtacctcata
ataatggactccatgacagaggaggaactggaaaaaccagacatcataaaacactcaaga
atacgcaggatagcccggggttcagggacgcgcaatgaggacgttaaggagctcctgaag
tactacagggtcaccaaaaaggccatgaaagggcttggaaggagaaagatgggtggaccc
atgggccagctcatgaggcagttcatgagatag

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