KEGG   Methanothermobacter sp. CaT2: MTCT_1642
Entry
MTCT_1642         CDS       T04009                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
metc  Methanothermobacter sp. CaT2
Brite
KEGG Orthology (KO) [BR:metc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:metc03400]
    MTCT_1642
Enzymes [BR:metc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MTCT_1642
    5.6.2.6  RNA 3'-5' helicase
     MTCT_1642
DNA repair and recombination proteins [BR:metc03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    MTCT_1642
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 DUF1424 TIP49 Ubiq_cyt_C_chap
Other DBs
NCBI-ProteinID: BAM70890
LinkDB
Position
complement(1615701..1618286)
AA seq 861 aa
MIVRQKKKYSGSRIHSVLHPWVSEWFRRTFDDFTEAQKYAIMDIHMGRNVLVSSPTGSGK
TLAAFLSIISELTTLADRGELEDSVYCIYISPLKALDNDIERNLEEPLQGIREIAEEEGR
DLEIRKAVRTGDTTSYERSRMLKNPPHILITTPETLSILLVAPKFREKLSTVRYVIVDEI
HSLADNKRGVHLSLSLERLQHLVGNFTRIGLSATVHPLERVAKFLVGYSYGNERDCIIVD
VNYLKELDIELICPVDDIVAADPEEIGNALYDILHDLIMEHRTTLIFTNTRSGTESVVYN
LKSRFPESYTDENIMAHHSSLSREIRLETEEKLKRGELKAVVSSTSLELGIDIGYIDLVV
LLSSPKSVSRALQRIGRSGHQLHEKSKGRIVVVDRDDLVECSLILKNAVEGKIDSIRVPE
NCLDVLAQHIYGMAIENPWDIDHALEVIRNSYCYRNLRREDYLSVLSYLAGEYAELEERY
VYAKIWVDHDKNMFGRRGKLARMLYSTNIGTIPDRSAAVVKCNGKVVGRIEEDFMEKLRK
GDTFVLGGKIYRFNYARGMTVNVSPASGPPNIPSWFSEQLPLSFDLAVDIQRFRDIMDGK
FQYGRSKAEIIEFIMDYLHVDERAAGSIYEYFREQYLYAAIPSIRRMLVEYYTGFGGRKF
IVFHSLFGRRVNDALSRAVAYVIARRYRRDVMISVSDNGFYLSSEGKMGGLESFMELEPE
NLREILKKALDRTETLASRFRHCAGRALMILRRYRGEEKSVGRQQVRGKILLKFVSELDD
RFPILEEARREVMEDYMDIENAIRVLEWIRDGEMEIKQIDTRIPSPFAFNLVAQGYLDVL
KYEDRIEFIRRMHQAILDEIR
NT seq 2586 nt   +upstreamnt  +downstreamnt
atgatagtcaggcagaagaagaaatactcaggcagcagaatacactctgtcctccacccc
tgggtcagcgaatggttcaggagaacctttgatgacttcacagaggcccagaagtatgcg
ataatggatatacacatggggaggaacgtccttgtatcgtcaccaacaggttcaggtaag
acactcgccgcgtttctttccataatcagtgaactcaccacacttgcggataggggtgaa
ctggaggacagtgtctactgcatatacatctcaccccttaaggcccttgataatgacata
gaaaggaaccttgaggaacccctccagggtataagggagattgcagaggaggagggcagg
gatcttgagataaggaaggctgtgcggaccggtgacaccactagctatgagcgctccagg
atgctcaaaaatcccccacacatccttataacgacccctgagacgctctcaatactcctt
gtggccccaaagttccgtgaaaagctttcaactgtgcgctatgttatcgtggatgaaata
cactcccttgcagataataagaggggtgttcacctttcactgagccttgagaggctgcag
caccttgtcggtaacttcacaaggatcggtttatctgcgacggtccatccacttgagcgt
gttgcaaaattcctggtgggttacagttatggtaatgaaagggactgcataatagtggac
gttaactaccttaaagaacttgacattgaactcatctgcccggttgatgatatcgtggcc
gctgaccctgaggaaattggtaatgccctctacgacatcctccacgacctcataatggaa
caccggacaaccctaatcttcaccaacacgcgaagcgggaccgagagtgtggtttacaac
ctgaaaagtcgcttccctgagagttacaccgatgaaaacatcatggcacaccactcatcg
ctttcaagggagataaggcttgaaacagaggagaaactcaagaggggtgagctgaaggcg
gttgtatcgtcaacgtcccttgaactcgggatagacatcgggtacattgacctggtggtt
cttctgagttcaccaaaatctgtttcaagggcccttcagcgtatcggaagaagcgggcat
cagcttcatgagaaatcaaagggacggatagttgtcgtggacagggacgaccttgttgag
tgttcactcatactcaagaacgccgttgagggtaaaatagattccataagggtacccgag
aactgcctggatgtcctggcacagcacatatacgggatggccattgagaacccgtgggac
attgaccatgcccttgaggttataaggaacagctactgctacaggaacctcaggagggag
gattacctctctgtactcagctaccttgcaggggagtatgcggagctcgaggagaggtac
gtctatgccaagatctgggttgaccacgacaagaacatgttcgggaggaggggtaaactt
gccaggatgctctactccaccaacatagggaccatacccgatagaagcgctgcggttgtt
aagtgcaacgggaaggttgtggggaggatagaggaggacttcatggagaaactcaggaag
ggcgacacctttgttctcggcgggaagatctacagattcaactatgcaaggggtatgacc
gtcaatgtcagccccgcctcagggccccccaacattccatcatggttctcagagcagctg
cccctctccttcgaccttgcagttgacatacagcgcttcagggacattatggatggtaag
ttccagtacgggcgttcaaaggcagagataatcgagttcataatggactacctccacgtg
gatgagagggccgcaggttcaatctacgagtatttccgtgaacagtacctatacgcggca
atacccagcatcaggaggatgcttgttgagtactacactggcttcgggggcagaaaattc
atcgtcttccacagcctctttggaaggagggttaacgacgccctatcaagggctgttgcc
tatgtcattgcaaggcgttaccggcgggacgttatgatatctgtatctgacaatggattc
tatctgagttcagagggaaagatgggtggtctcgagtcattcatggaacttgaacctgag
aacctccgggagatacttaagaaggcccttgaccggacagaaacccttgcaagcaggttc
aggcactgcgctggccgtgccctcatgatactccgcaggtaccggggggaggagaagtct
gttggcagacagcaggttaggggtaagatactccttaaatttgtgagtgaactggatgac
aggttccccatactcgaggaggcccgcagggaggttatggaggactacatggacatcgag
aatgccatcagggtccttgaatggatccgtgatggtgagatggagatcaagcagattgac
acgaggataccctcaccatttgcctttaacctggttgcccagggctacctggatgtgctc
aagtatgaggaccggatagaattcatcaggaggatgcatcaggccatactggatgagatc
aggtga

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