Methylobacterium sp. DM1: C0214_00530
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Entry
C0214_00530 CDS
T05461
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
metd
Methylobacterium sp. DM1
Brite
KEGG Orthology (KO) [BR:
metd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
metd03032
]
C0214_00530 (ihfB)
03036 Chromosome and associated proteins [BR:
metd03036
]
C0214_00530 (ihfB)
03400 DNA repair and recombination proteins [BR:
metd03400
]
C0214_00530 (ihfB)
DNA replication proteins [BR:
metd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
C0214_00530 (ihfB)
Chromosome and associated proteins [BR:
metd03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
C0214_00530 (ihfB)
DNA repair and recombination proteins [BR:
metd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
C0214_00530 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_1
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AWI86980
LinkDB
All DBs
Position
complement(103432..103740)
Genome browser
AA seq
102 aa
AA seq
DB search
MIKSELVLKIAEQNPHLYQRDVESLVNAILDTIADALAQGDRVELRGFGAFSVKRREARR
GRNPRTGESVAVSEKAIPVFKTGKEMRLRLNRAGIGDEQPSA
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagtcggaactcgtgctcaagatcgcagagcagaatcctcacctctatcagcgc
gacgtcgagtccctcgtcaacgcgatcctggacaccatcgctgatgcgcttgctcagggg
gaccgggtggagctgcgtggctttggggccttctcggtcaaacgccgcgaggcacggcgc
ggccgcaacccccgcaccggcgagtccgtagcggtttcggagaaggcgatcccggtcttc
aagaccgggaaggagatgcgcctgcgcctcaaccgagccggcatcggcgacgagcagccg
agcgcctga
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