Methylobacterium sp. DM1: C0214_01430
Help
Entry
C0214_01430 CDS
T05461
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
metd
Methylobacterium sp. DM1
Pathway
metd03420
Nucleotide excision repair
metd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
metd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C0214_01430
03430 Mismatch repair
C0214_01430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metd03400
]
C0214_01430
Enzymes [BR:
metd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C0214_01430
DNA repair and recombination proteins [BR:
metd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C0214_01430
MMR (mismatch excision repair)
Other MMR factors
C0214_01430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_12
DUF3553
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AWI87129
LinkDB
All DBs
Position
310001..312370
Genome browser
AA seq
789 aa
AA seq
DB search
MMQEPDAIRPRPSDDDAPSAPTSIAARAMAALRPESASYLSGLNPEQRRAVEATEGPVLV
LAGAGTGKTRVLTTRIAHLIATGKARPYDILSVTFTNKAAREMKHRIGGLIGPAGEGMPW
LGTFHAIGTKILRRHAELVGLKSDFTILATDDQLRLMKQVIADQNIDEKRWPARSLAHTI
DGWKNRGLGPEQVPPGEAQAFAFGKGGQLYAAYQARLATLNAVDFGDLLLLCLKLWRENP
DILRNYQDRFKYILVDEYQDTNVAQYLWLRLLAQLRKNVACVGDDDQSIYGWRGAEVDNI
LRFEHDFPGATVVRLERNYRSTGHILAAASGLIAKNEGRLGKTLRTEDEKGEPVTVTGAW
DSEEEARQVAESIESLQRKGHALSEIAVLVRISAQMREIEDRFVQVGLPYRVIGGPRFYE
RAEIRDALAYLRVTMNGADDLAFERIFNTPKRGLGDATLQTLHAYARADRIPLLAAARKL
IETDELKPRARSMLRGLVESFSRWVRLVEAKPHPEVAQTILEESGYTEMWQKDRSADAAG
RLENLKEFVRSMEEFPDMAAFLEHVSLVMEASEAEGADRVSLMTLHAAKGLEFDTVFLPG
WEDGLFPNQRAIDESGRAGLEEERRLAHVGLTRARKRAKLSFAVNRRIHGLWSSTIPSRF
IDELPPQAVDVVEAPAHFSAGASRFDRNPAPFGSSYGTPGWQRAQANTSGGFGGGLGQGR
GGRSGGPREIEGELIAKSTGAPSSFEHGQRVFHTKFGPGTVAGIDGNKLTVDFDKAGRKM
VLDSFLQPG
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaagagccagacgcgatccggccgcgcccgtccgacgacgatgcgccgtcggcc
ccgacctccatcgccgcccgcgccatggccgcccttcggcccgagagcgcgtcctacctc
tccggcctgaacccggagcagcgccgcgccgtggaggccactgaaggcccggtgctcgtg
ctcgcgggcgcggggaccggcaagacgcgggtgctgacgacgcggatcgcccacctgatc
gccacgggcaaggcgcggccctacgacatcctctcggtgaccttcaccaacaaggccgcc
cgcgagatgaagcaccgcatcggcgggttgatcggcccggcgggcgaaggcatgccctgg
ctcggcaccttccacgccatcggcaccaagatcctgcgccgccacgccgaactggtcggc
ctcaaatccgacttcacgattctggccaccgacgaccagcttcgcctgatgaagcaggtc
atcgctgaccagaacatcgacgagaagcgctggccggcccgctcgctggcccacaccatc
gacggttggaagaaccgcggcctcgggcccgagcaggtgccgccgggcgaagcgcaggcc
ttcgccttcggcaagggcgggcagctctacgctgcctaccaggcccggcttgccaccctc
aacgcggtcgatttcggcgatcttctgctgctctgcctcaagctgtggcgtgagaacccc
gacatcctgagaaattaccaggatcgtttcaaatatatcctggtcgacgagtatcaggat
accaacgtcgcgcagtatctttggctgcgcctgctggcgcaacttcggaagaacgtcgcc
tgcgtcggcgacgacgatcagtcgatctacggttggcgcggcgccgaggtcgacaacatc
ctgcgcttcgaacacgattttcccggcgcgacggtggtgcggctggagcgcaactaccgc
tcgaccggccacatcctcgccgccgcctcgggactgatcgccaagaacgaggggcgactc
ggcaagacgctgcggacggaggacgagaagggcgagccggtcaccgtgaccggcgcatgg
gattcggaggaagaggcgcgacaggtcgccgaatcgatcgagtcgctgcaacgcaaaggg
catgcgctgtccgagatcgcggtcctggtgcggatctcggcgcagatgcgcgagatcgag
gatcgcttcgttcaggtcggcctgccctatcgcgtcatcggcggcccgcgcttctacgag
cgggccgagatccgcgacgcgctggcctacctgcgcgtcaccatgaacggcgccgacgac
ctcgctttcgagcgtatcttcaacacgcccaagcgcggcctgggcgatgccacgctccag
accctgcacgcctatgcccgcgccgaccgcattcctctgcttgccgccgcgcgaaagctg
atcgagaccgacgagttgaagccccgtgcccgctcgatgctgcgcggtctcgtcgaaagc
ttttcgcgctgggtgcggctggtcgaggccaagcctcatccggaggtcgcgcagacgatt
ctggaggaatccggctacaccgagatgtggcagaaggaccgctcggccgacgccgccggg
cggctcgaaaacctcaaggaattcgtccgctcgatggaagaattccccgacatggccgcc
ttcctcgaacacgtctcactggtgatggaagcctccgaggcggaaggcgccgaccgtgtc
tcactgatgacgctgcacgccgccaaggggctggagttcgacacggtgttcctgcccggc
tgggaggacggcctgtttccgaaccagcgcgccatcgacgagagcgggcgggccggcctg
gaggaggagcggcgactcgcccatgtcgggctcacccgcgcccgcaagcgcgccaagctg
tcctttgccgtcaacaggcgcatccacggcctctggtcctcgaccatcccctcgcgcttc
atcgacgagttgccgccccaggccgtggatgtggtggaggcgcccgcgcatttctcggcc
ggcgcttcccgcttcgaccgcaacccggccccgttcggctcctcctacggcacgccgggt
tggcagcgggcacaggccaacacctctggcggattcggcgggggactcgggcagggacgc
ggcggccgatcaggcgggccgcgggagatcgaaggcgagctgatcgccaaatcgacgggc
gccccgtcttctttcgagcatggccaacgggtcttccacaccaagttcggccccggcacg
gtcgctggcatcgacggcaacaagctcaccgttgacttcgacaaggccggccggaagatg
gtgctcgacagcttcctccagcccggttga
DBGET
integrated database retrieval system
