Methylobacterium sp. DM1: C0214_04295
Help
Entry
C0214_04295 CDS
T05461
Name
(GenBank) amino acid decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
metd
Methylobacterium sp. DM1
Pathway
metd00330
Arginine and proline metabolism
metd00480
Glutathione metabolism
metd01100
Metabolic pathways
metd01110
Biosynthesis of secondary metabolites
metd04148
Efferocytosis
Module
metd_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
metd00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
C0214_04295
09106 Metabolism of other amino acids
00480 Glutathione metabolism
C0214_04295
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
C0214_04295
Enzymes [BR:
metd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
C0214_04295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
DUF7588
Ribosomal_L27e
Motif
Other DBs
NCBI-ProteinID:
AWI87604
LinkDB
All DBs
Position
complement(911488..913833)
Genome browser
AA seq
781 aa
AA seq
DB search
MDFHRRFTVLMCTPAFDPDDLEGARVEQIVAAVESRGFEVVRARRVEDASIAVQTDSAVG
CLVVDWGKRGLEGKAAALIDMMRRRGLDMPIVIMVRRKRLEDIPVELLDFIDGYIFLAEE
TPEFIARNLVSRVTQYADTLKTPFFGALVDYAEEGNQLWTCPGHNGGIFYNRSPIGRIFV
EHLGEAIFRDDLDNSVLDLGDLLTHEGPALKAQKEAAKIFGAEKTYFVLNGTSASNKVVL
GSLVAEDDLVLFDRNNHKAAHHGALLLAGGIPIFLETDRNAYGLIGPIYHEALDEQRIRE
KIRDNPLVKDKEAWRRERPFRCAVIEQCTYDGTIYDAQELVERIGHLCDYILFDEAWAGF
MKFHPLYQRRFAMGLTGLDETSPGIIATQSTHKQLASFSQASQIHTRDGHIRGQTRRVEH
KRLNESFLVHASTSPFYPIFASLDVGAQMMKGRSGVVLWDDTIRLGIEWRKKARAIRKEF
EEREADPKRRWFFDPFVPDVVTGPDGTEIPWEAVPTDALAADARYWELTPGAAWHGFTHV
APGFAITDPNKLTVLTPGFDRKTGAYAEHGVPAPIVAQYLRENRIVPEKNDLNSLLFLLT
PGVESSKAGTLISGLVAFKRLHDDNVPLEEAMPEFVARRPKRYHGVGLRDLCADYHSFHR
ESGTSALQRKQFMPEHLPDMVMPPKAAAQMLTRNRVDYVPIAEAEGRIATTLMLVYPPGI
GTVLPGERLDERAKPMLDYFKMFEAAANLFPGFEAEIQGVYRETDPDGRIRFHTYVVREG
A
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggattttcaccgccgtttcaccgtgctgatgtgcacgcccgccttcgatccggatgat
ctggaaggggcgcgggtcgagcagatcgtcgcagcggtcgagtcgcgcggcttcgaggtg
gtgcgggcccggcgcgtcgaggacgcctcgatcgcggtgcagaccgactcggcggtcggc
tgcctcgtggtcgattggggcaagcgcgggctcgagggcaaggccgccgccctcatcgac
atgatgcgccggcgcggcctcgatatgccgatcgtcatcatggtccgccgcaagcggctg
gaggacatcccggtcgagctgctcgacttcatcgacggctacatcttcctcgcggaagag
accccggaattcatcgcccgcaacctcgtctcccgcgtgacgcagtacgccgacacgctg
aagacgccgttcttcggcgcgctggtcgattacgccgaggagggcaaccagctctggacc
tgccccggccataacggcggcatcttctacaaccgctcgccgatcggccgcatcttcgtc
gagcatctgggcgaggcgatttttcgcgacgacctcgacaactcggtgctcgacctcggc
gacctgctgacccacgaggggcccgcgctaaaggcgcaaaaggaagcggcaaaaatcttc
ggggcggagaagacctacttcgtcctcaacggcacctcggcctcgaacaaggtcgtgctg
ggctcgctggtggccgaggacgacctcgtcctgttcgaccgcaacaaccacaaggccgcc
catcacggcgcgctgctgctcgccggcggcatcccgatcttcctggagaccgaccgcaac
gcctacggtctgatcgggccgatctaccacgaggctctggacgagcagcgcattcgcgaa
aagatccgcgacaacccgctggtgaaggacaaggaggcgtggcgccgggagcgcccgttc
cgctgcgcggtgatcgagcaatgcacctatgacggcacgatctacgacgcgcaggagctc
gtcgagcggatcggccacctgtgcgactacatcctgttcgacgaggcctgggcgggcttc
atgaagttccacccgctctaccagcgccgcttcgccatgggcctgacagggctcgacgag
acctcgccgggcatcatcgccacgcaatcgacccacaagcagctcgccagcttcagccag
gcctcgcagatccacacccgcgacgggcatatccgcggccagacccggcgggtcgagcac
aagcgcctgaacgagagcttcctcgtccacgcctcgacctcgccgttctacccgatcttc
gcctcgctcgatgtcggcgcgcagatgatgaagggccgctccggcgtagtgctgtgggac
gacacgatccggctcggcatcgagtggcgcaagaaggcccgcgcgattcgcaaggagttc
gaggagcgcgaggccgatccgaagcggcgctggttcttcgaccccttcgtgcccgatgta
gtgaccggcccggacggcacggaaatcccctgggaggcggtgccgaccgacgcgctcgcc
gccgatgcccgctactgggagttgacgccgggcgcggcctggcacggcttcacccatgtc
gcaccgggctttgccatcaccgaccccaacaagctcacggtgctcacccccggtttcgac
cggaagaccggcgcctatgccgagcacggcgtgccggcgccgatcgtcgcgcaatacctg
cgcgagaaccggatcgtgccggagaagaacgatctcaactcgctgctcttcctgctgacg
ccgggcgtcgagtcgtcgaaggcgggcacgctgatctccggcctcgtcgccttcaagcgc
ctgcacgacgacaacgtgccgctcgaagaggcgatgccggaattcgtcgcccgccggccc
aagcgctaccacggtgtcggcctgcgcgatctgtgcgccgactatcacagcttccaccgc
gaatcgggcacctcggcgctccagcgcaagcagttcatgcccgagcacctgcccgacatg
gtgatgccgcccaaggccgctgcgcagatgctgacgcgcaaccgggtcgattacgtgccg
atcgcggaagcggaagggcgcatcgccaccaccctgatgctggtctatccgcccggcatc
ggcaccgtgctgccgggcgagcgtctggatgagcgggcgaaacccatgctcgactacttc
aagatgttcgaggcggccgccaacctgttccccggcttcgaggccgagatccagggcgtc
taccgcgagaccgatccggacgggcgcatccgcttccacacctacgtcgtgcgcgagggc
gcctga
DBGET
integrated database retrieval system