Methylobacterium sp. DM1: C0214_11255
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Entry
C0214_11255 CDS
T05461
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
metd
Methylobacterium sp. DM1
Brite
KEGG Orthology (KO) [BR:
metd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
metd03032
]
C0214_11255
03400 DNA repair and recombination proteins [BR:
metd03400
]
C0214_11255
Enzymes [BR:
metd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
C0214_11255
DNA replication proteins [BR:
metd03032
]
Prokaryotic type
DNA Topoisomerases
C0214_11255
DNA repair and recombination proteins [BR:
metd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C0214_11255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AWI88777
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All DBs
Position
2360657..2361853
Genome browser
AA seq
398 aa
AA seq
DB search
MLSEEAGAGVVDPREAARDAGLRYVDDSKPGLRRKRNGKGFRYIDPKGAAVSDPKEIARL
KSLAIPPAYTDVWICPHPNGHIQATGRDEKGRKQYRYHPRFREAREASKFHRIMTFAEAL
PGIRARIDADMGKRGLPREKVLATVVHLLETTLIRVGNDDYARSNKSYGLTTLRDPHVKI
AGSEMRFRFKGKSGKEWSVSVRDRRVAKIVKACQDLPGQELFQYLDDEGERRDVTSSDVN
AYLREITGEDFTAKDFRTWAGTVLAALALREFEAFDNAAKAKKNLRAAIESVAGRLGNTP
TICRKCYIHPQILDCYLEGGMLLQVKEAVEGELKSGLDALRPEEAAVLSLLRGRLERATK
AAAADPDGTAKIAPPRQTGGRKAKPTGTKRTSGGRQAA
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcggaggaggccggagccggcgtagtcgatccccgcgaggccgcgcgggatgcg
ggcctgcgctacgtggacgattcgaagcccggcctgcggcgcaagcgcaacggcaagggc
ttccgctacatcgatccgaaaggcgcggcggtgagcgatccgaaagaaatcgcccggctc
aaaagcctcgcgatcccgccggcctacacggatgtgtggatctgcccgcaccccaacggt
cacatccaggcgaccgggcgcgacgagaaggggcgcaagcagtaccgctaccatccccgc
ttccgcgaggcgcgggaggcctcgaagttccaccgcatcatgaccttcgccgaggcgctg
ccgggcattcgcgcgcggatcgacgccgatatgggcaagcgcggcctgccgcgggaaaag
gtgctcgccaccgtggtccacttgctggaaaccacgctgatccgcgtcggcaacgacgat
tacgcccgctccaacaagagctacggcctcaccaccctgcgcgatccgcacgtgaagatc
gccggttccgagatgcgtttccgcttcaagggcaagagcggcaaggaatggtcggtctcg
gtccgcgaccggcgcgtcgccaagatcgtcaaggcctgccaggacctgcccggccaggag
ctgtttcagtatctcgacgacgagggcgagcgtcgcgacgtcacctcctccgacgtgaac
gcgtatttgcgcgagatcacgggcgaggatttcacggcaaaggatttccgcacctgggcc
ggcaccgtgctcgccgccctggcgctgcgggagttcgaggcgttcgacaacgcggccaag
gccaagaagaaccttcgcgcggcgatcgagtcggtggccgggcggctcggcaacacgccg
accatctgccgcaagtgctacatccacccgcagatcctcgactgctacctcgaaggcgga
atgctgctgcaggtgaaggaggcggtcgagggtgaacttaagagcggcctcgatgccctg
cgcccggaggaggcggcggtgctgagcctgctcagagggcggttggagcgggcaacgaag
gccgccgcggccgatcccgacggcacggcgaagatcgcgccgccgcgccagaccgggggc
cgcaaggcgaagccgaccggcacgaagcgcacctccggcggtcgccaggcggcgtga
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