Methylobacterium sp. DM1: C0214_12825
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Entry
C0214_12825 CDS
T05461
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
metd
Methylobacterium sp. DM1
Brite
KEGG Orthology (KO) [BR:
metd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
metd03009
]
C0214_12825
Enzymes [BR:
metd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
C0214_12825
Ribosome biogenesis [BR:
metd03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
C0214_12825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SFTA2
MalQ_N
Motif
Other DBs
NCBI-ProteinID:
AWI89065
LinkDB
All DBs
Position
2682458..2683186
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AA seq
242 aa
AA seq
DB search
MKALRLDRLLANLGYGSRREVEGLARAGLVRLDGQALRDASQRIPLEPDLSARMTVQGEA
LDPLPGLCLMLHKPLGVTCSHKEAGPLVYGLLPERWRRRDPALSTVGRLDKETSGLLLMT
DDGALLHRIISPKAKVSKRYRVSLARPLQGDEAAILASGAMMLEGEDKPLLPVEMETDDP
THCTVTLHEGRYHQVRRMFAALGNHVDALHRDRVGGLALPADLPAGEFRILGPGEIATLF
EG
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcgctccgcctcgaccggctgctggccaatctcggctacggctcgcgccgggag
gtcgaggggttggcccgcgccgggcttgtccgcctcgacggtcaggccctgcgggacgcc
tcgcagcgcatcccgctcgagcctgacctatccgcccgaatgacggtgcagggggaggcg
ctcgatccgctgcccggcctctgcctgatgctgcacaagccgctcggcgtcacctgctcg
cacaaggaggcggggccgctggtctacggcctgctgcccgagcgctggcggcggcgcgat
ccggcgctctccaccgtcggacgtctcgacaaggagacctcgggcctcctgctgatgacg
gacgacggcgcgctgctgcaccggatcatctcgccgaaggccaaggtctccaagcgctac
cgggtgagcctggcccgcccgctccagggcgacgaggccgcgatcctcgcctccggagcg
atgatgctggagggcgaggacaagccgctcctgccggtggagatggagacggacgacccg
acccactgcacggtgaccctgcacgaggggcgctaccatcaggtgaggcggatgttcgcc
gccctcggcaaccacgtcgatgcgctccaccgcgaccgcgtcggcggtctcgcccttccc
gccgacctgccggcgggagagttccgcatcctgggccccggcgagatcgccaccttgttc
gaggggtag
DBGET
integrated database retrieval system
