Methylobacterium sp. DM1: C0214_14135
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Entry
C0214_14135 CDS
T05461
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
metd
Methylobacterium sp. DM1
Brite
KEGG Orthology (KO) [BR:
metd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
metd03016
]
C0214_14135
Enzymes [BR:
metd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
C0214_14135
Transfer RNA biogenesis [BR:
metd03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C0214_14135
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AWI89294
LinkDB
All DBs
Position
2984634..2985263
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AA seq
209 aa
AA seq
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MSAAPSRIRLHQGDLPPDFAPGAAIAIDTETLGLNPHRDRLCVVQVSRGDGSADVVQIRP
GDPVPERLAAVLADPKVVKIFHFARFDLAVLFKAFGVMPAPIYCTKVASKLARTYTDRHG
LKDVVRELVGVDLSKQQQSSDWGAEALSQAQIDYAASDVLYLHAARERLDAMLVREGRTE
MARACFDFLPTRAKLDLAGWPEVDIFAHA
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgccccttctcggatccgcctgcaccagggcgatctgccgcccgatttcgcg
cccggtgcggccatcgccatcgataccgagacgctggggctcaacccgcaccgcgaccgg
ctctgcgtcgtgcaggtctcccgcggcgacggcagtgccgacgtcgtgcagatccgcccc
ggcgatccggtgcccgagcggctcgcggccgtcctcgccgacccgaaggtcgtcaagatc
ttccacttcgcccggttcgatctcgccgtgctgttcaaggcgttcggcgtgatgccggca
ccgatctactgcaccaaggtcgcctccaagctcgcccgcacctataccgaccgtcacggc
ctcaaggacgtggtgcgcgaactcgtcggcgtcgatctctccaagcagcagcaatcctcc
gattggggcgccgaggctctgagccaggcgcagatcgactatgcggcctccgacgtgctc
tacctgcatgctgcccgcgagcggctcgacgcgatgctcgtccgcgagggacgcacggag
atggcgcgggcctgtttcgacttcctgccgacgcgggccaagctcgatctcgccggatgg
ccggaggtcgacatcttcgcccacgcctga
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