Methylobacterium sp. DM1: C0214_15125
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Entry
C0214_15125 CDS
T05461
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
metd
Methylobacterium sp. DM1
Brite
KEGG Orthology (KO) [BR:
metd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
metd03016
]
C0214_15125
Enzymes [BR:
metd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
C0214_15125
Transfer RNA biogenesis [BR:
metd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C0214_15125
Prokaryotic type
C0214_15125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AWI89476
LinkDB
All DBs
Position
complement(3192059..3193084)
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AA seq
341 aa
AA seq
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MQDEISSERASEAPQGPRGDMGRDGPPRGARRPQRGRPRHDRPKKNDVSGWVVLDKGVGI
TSTQAVAVVKRLFNAKKAGHAGTLDPLASGILPIALGEATKTVPFVMDGRKAYRFEVTWG
IETDTDDAEGRPVETSENRPTREAIEAALPAFVGEIEQVPPRFSAIKIQGERAYDLARDG
EVVELVARQVRIDHLSVIEHHGDRTVIAAECGKGTYVRALARDLGRVLGCYGHVSALRRT
RVGPFEEATACTVAALEESTEMHLHPVETALEEIPSVAVSRDMGLRLMRGQPVILRGHDA
PVGGKAYATCGGVLVAVGDVERGELVPHRVFHLGGTAPQRN
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgagatttcttccgaacgcgcgagcgaggccccgcagggtccgcgcggcgac
atgggccgggacgggccgccgcggggcgcccgccgccctcagcgcggccggccgcgccac
gaccgcccgaagaagaacgacgtgagcggctgggtggtgctcgacaagggcgtcggcatc
acctcgacccaggcggttgcggtggtgaagcgcctgttcaatgccaagaaggcgggccat
gccggcacgctcgacccgctggcctccggcatcctgccgatcgcgctcggtgaagcgacg
aagacggtccccttcgtgatggacgggcgcaaggcctatcgcttcgaggtgacctggggc
atcgagaccgacactgacgacgcagagggacgtccggtcgagacttccgagaaccggccg
acccgcgaagcgatcgaggcggctctcccggctttcgtcggcgagatcgagcaggtgccg
ccgcgcttctccgccatcaagatccagggcgagcgcgcctacgatctcgcccgtgacggc
gaggtggtggagctcgtcgcccggcaggtgcgcatcgatcatctctcggtcatcgagcat
cacggcgaccgcaccgtcatcgccgccgagtgcggcaagggcacctatgtccgcgccctg
gcccgcgacctcgggcgcgtgctcggctgctacggccacgtctcggctctgcgccggacc
cgtgtcggacccttcgaggaggcgacggcgtgcaccgtcgccgcgctggaggagagcacg
gaaatgcatctccatccggtcgaaacggctctggaggagatcccgtcggtggcggtcagc
cgcgacatggggctgcgcctgatgcgcggccagccggtgatcctgcgcggtcacgatgcg
ccggtcggcggcaaggcttacgcgacctgcggcggcgttctcgtcgccgtcggcgatgtg
gagcgcggcgaacttgtgccgcaccgcgtgttccatctcggtggaacggcgccgcagaga
aactaa
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