Methylobacterium sp. DM1: C0214_15290
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Entry
C0214_15290 CDS
T05461
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
metd
Methylobacterium sp. DM1
Pathway
metd00900
Terpenoid backbone biosynthesis
metd01100
Metabolic pathways
metd01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
metd00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
C0214_15290
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
metd01006
]
C0214_15290
Enzymes [BR:
metd01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
C0214_15290
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
C0214_15290
2.5.1.29 geranylgeranyl diphosphate synthase
C0214_15290
Prenyltransferases [BR:
metd01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
C0214_15290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AWI89506
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All DBs
Position
3236956..3237822
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AA seq
288 aa
AA seq
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MDVGRRIEAVLDVAVSHAEAPGAPPLLAEAIRYAVFPGGHRIRPRLCLAVAQACGDDDPT
ASDAAAAAIELLHCASLIHDDLPCFDDAPMRRQKPSVHAAFGVPLAVLTGDALIVAAFET
LARGAARSPARLASLVGLVARAVGSPSGIVAGQAWESEPHVDLVEYQQAKTGALFAAATV
AGAAAAGAAPLPWRLLGECLGEAYQVADDLRDVACRQEEIGKPAGRDATLGRPNAAALLG
MSGALERLRRLTQEAIEVIPACPGQALMRAEIEAQTRLFLPASLREAA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcggtcggcggatcgaggcggtgctcgatgtggcggtatcgcacgcggaggcg
ccgggcgccccgccgctcctcgccgaggcgatccgctacgcagtgtttcccggcggccac
cggatccgcccgcggctctgcctcgccgtcgcccaggcctgcggcgacgacgatcccacc
gcctccgacgccgcagcggcggcgatcgaactgctgcactgcgcctccctcatccacgat
gacctgccctgtttcgacgacgcgccgatgcggcgccagaagccctcggtccacgctgct
ttcggcgtgccgctcgccgttctcaccggcgatgcgctgatcgtcgcggccttcgagacg
ctggctcggggggcggcccgctcgcccgcccggctcgcttccctggtcggcctcgtggcc
cgcgccgtcggctccccctcgggcatcgtcgcgggacaagcctgggaatccgagccgcat
gtcgatctcgtcgagtatcagcaggccaagaccggcgcgttgttcgccgccgcgaccgtc
gcgggcgcggcggcggcgggcgcggcgcccttgccctggcggcttctcggcgaatgcctc
ggcgaggcctaccaagtcgccgacgatctgcgcgacgtggcctgccgccaagaggagatc
ggcaagcccgccggccgcgacgcgaccctcgggcgcccgaacgccgccgcccttttggga
atgagcggtgccctcgagcggctcaggcggctgacgcaggaggcgatcgaggtgatcccg
gcctgccccggtcaggcgctgatgcgtgccgagatcgaggcacagacgcgcctgttcctg
cccgcttccctgcgcgaagcggcttga
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