Methylobacterium sp. DM1: C0214_15745
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Entry
C0214_15745 CDS
T05461
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
metd
Methylobacterium sp. DM1
Pathway
metd02024
Quorum sensing
metd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
metd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C0214_15745
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C0214_15745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
metd03019
]
C0214_15745
03036 Chromosome and associated proteins [BR:
metd03036
]
C0214_15745
Messenger RNA biogenesis [BR:
metd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
C0214_15745
Chromosome and associated proteins [BR:
metd03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
C0214_15745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
AcMNPV_AC11
Motif
Other DBs
NCBI-ProteinID:
AWI89583
LinkDB
All DBs
Position
3337585..3337839
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AA seq
84 aa
AA seq
DB search
MAGERAQNLQDTFLNHVRKNKIPLTIFLVNGVKLQGVVTWFDNFCVLLRRDGHSQLVYKH
AISTIMPGHPVQLFEPDETAPEKA
NT seq
255 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgagcgcgctcagaacctccaggacacgttcctgaaccatgtccgcaaaaac
aagatcccgctgacgatcttcctcgtcaatggcgtcaagcttcaaggtgtcgtgacctgg
ttcgacaacttctgcgtcctgctccgccgcgacgggcactcgcagctcgtctacaagcac
gcgatctcgacgatcatgccgggacacccggtgcaactgttcgagccggacgagacggcg
cccgagaaggcgtga
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