Methylobacterium sp. DM1: C0214_17935
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Entry
C0214_17935 CDS
T05461
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
metd
Methylobacterium sp. DM1
Pathway
metd00071
Fatty acid degradation
metd00280
Valine, leucine and isoleucine degradation
metd00310
Lysine degradation
metd00362
Benzoate degradation
metd00380
Tryptophan metabolism
metd00410
beta-Alanine metabolism
metd00640
Propanoate metabolism
metd00650
Butanoate metabolism
metd00907
Pinene, camphor and geraniol degradation
metd00930
Caprolactam degradation
metd01100
Metabolic pathways
metd01110
Biosynthesis of secondary metabolites
metd01120
Microbial metabolism in diverse environments
metd01200
Carbon metabolism
metd01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
metd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
C0214_17935
00650 Butanoate metabolism
C0214_17935
09103 Lipid metabolism
00071 Fatty acid degradation
C0214_17935
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
C0214_17935
00310 Lysine degradation
C0214_17935
00380 Tryptophan metabolism
C0214_17935
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
C0214_17935
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
C0214_17935
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
C0214_17935
00930 Caprolactam degradation
C0214_17935
Enzymes [BR:
metd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
C0214_17935
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
C0214_17935
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
C0214_17935
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DAO
NAD_binding_2
F420_oxidored
UDPG_MGDP_dh_N
NAD_Gly3P_dh_N
Sacchrp_dh_NADP
ApbA
FAD_binding_3
NAD_binding_8
2-Hacid_dh_C
Pyr_redox_2
GIDA
TrkA_N
Pyr_redox
AlaDh_PNT_C
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
AWI89979
LinkDB
All DBs
Position
complement(3781597..3783798)
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AA seq
733 aa
AA seq
DB search
MTATENFRFETNAEGIALATWDMPGRSMNVITMDVMAELERIVDAVVADEAIKGCVIVSG
KNNFSGGADLTMLQGLGVEYERLKASEGEAVAMRHFFEESRRLSLVFRKLETCGKPFAAA
VHGLCLGGAFELALACHHRVLADDDKTRVGLPEIKVGLFPGGGGTQRVSRLMQTGDALQM
LFKGEQIRPLMAKNMGLAHAVAPAAEIVERAKAWIREGGSAVAPWDVPKFKAPSGKVYSP
AGMMIWPPANAIYRRETHDNYPAAKAILASVYEGLQLPMDLGLKVESRYFAHILRTKEAQ
AMIRTLFISMGEINKGARRPKDVEPTKVGKVGVIGAGFMGAGIAYVTAQAGMEVVLIDRD
QEAADAGKAHCHKLITGQINRGKAKTADRDALLARITATPDYAALSDCDLVIEAVFEDPR
VKAEVIAKVEAALPEHAIFASNTSTLPISGLAQTSKRPDQFVGIHFFSPVEKMLLVEIIR
GNQTGDRAVATALDYVRAIKKTGIVVNDSRGFFANRCVLAYIKEGHKMLAEGVPPAMIEN
VARMAGMPVGPLSLNDEVALDLGLKIMRATEAQLGEGAVDPDQKRLLVAMVETHGRLGRK
NKRGFYDYPEGGQKKLWPGLAEIQPDRLDPDSLDVEELKHRFLVVQALEAARTMQEGVVT
DPREADVGSILGFGFAPFTGGALSYIDFMGAAAFVDLARVLEARHGARFTPPDNLLAMAE
SGGRFYDALKQAA
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccaccgagaatttccgcttcgagaccaatgccgagggcatcgcgctcgcgacc
tgggacatgcccggccgctcgatgaacgtcatcacgatggacgtgatggcggaactggaa
cggatcgtcgacgcggtcgtcgccgacgaggcgatcaagggctgcgtcatcgtctcgggg
aagaacaacttctccggcggcgccgacctcaccatgcttcagggcctcggggtcgagtac
gagcggttgaaggcgagtgagggcgaggcggtggccatgcgccacttcttcgaggagtcg
cggcgcctcagcctcgtgttccgcaagctcgagacctgcggcaagccgttcgccgccgcg
gtgcacggcctctgcctcggtggtgcgttcgagctggcactggcctgccaccaccgggtg
ctcgccgacgacgacaaaacccgtgtcggcctgcccgagatcaaggtcggcctgttcccc
ggcggcggcggcacccagcgcgtgtcccgtctgatgcagaccggcgacgcgctgcagatg
ctgttcaagggcgagcagatccgtccgctcatggccaagaacatgggactggcccacgcc
gtcgccccggcggcggagatcgtcgagcgggccaaagcctggatccgcgagggcggctcg
gcggtggcaccgtgggacgtgccgaagttcaaggcgccgtccggcaaggtctactcgccg
gccggcatgatgatctggccgccggccaatgcgatctaccgccgcgagacccacgacaat
taccccgcggcaaaagcgatcctcgcctcggtctacgagggcctgcaactgccgatggat
ctcggcctcaaggtcgagagccgctacttcgcccacatcctgcgcaccaaggaggcgcag
gcgatgatccgcaccctgttcatctccatgggcgagatcaacaagggcgcccgccgtccg
aaggacgtggagccgaccaaggtcggcaaggtcggcgtcatcggcgccggcttcatgggc
gcgggcatcgcctacgtcacggcgcaggccgggatggaggtcgtgctgatcgaccgcgac
caggaagccgccgatgccggcaaggcgcattgccacaagctcatcaccggccagatcaac
cgcggcaaagccaagaccgccgaccgcgacgcgctgctggcccgcatcaccgcgacaccc
gattatgccgcgctctcggactgcgatctcgtcatcgaggcggtgttcgaggatccgcgg
gtgaaggccgaggtgatcgcgaaggtcgaggcggcgctgccggagcacgcgatcttcgcc
tccaacacctcgaccctgccgatctcagggctcgcccagacctcgaagcggcctgaccaa
ttcgtcggcatccacttcttctcgccggtcgagaagatgctgctcgtggagatcatccgc
ggcaatcagaccggcgaccgagcggtggccaccgccctcgactacgtccgcgcgatcaag
aagaccggcatcgtcgtcaacgattcccgtggcttcttcgccaaccgctgcgtgctcgcc
tacatcaaggagggccacaagatgctcgccgagggcgtgcccccggcgatgatcgagaac
gtggcgcggatggccggcatgccggtcggcccgctctcgctcaacgatgaggtggcactc
gatctcggcctcaagatcatgcgcgcgaccgaggcgcagctcggcgagggcgccgtcgat
ccggaccagaagcggctcctcgtcgcgatggtcgagacccacggccggctcggtcgcaag
aacaagcgcggcttctacgactacccggaaggcggccagaagaagctctggccggggctc
gccgagatccagccggaccggctcgacccggacagcctcgacgtggaggaactgaagcac
cgcttcctcgtggtgcaggcgctggaggccgcccgcacgatgcaggaaggcgtggtgacc
gatccgcgcgaggcggatgtcggctcgatcctcggcttcggcttcgccccgttcaccggc
ggcgcgctctcctacatcgacttcatgggcgcggcggcattcgtggacctggcccgtgtc
ctggaagcccggcacggcgcccgcttcaccccgccggacaacctgctggcgatggccgag
tccggggggcgcttctacgatgcgctgaagcaggcggcgtaa
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