Methylobacterium sp. DM1: C0214_18770
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Entry
C0214_18770 CDS
T05461
Name
(GenBank) type III PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
metd
Methylobacterium sp. DM1
Pathway
metd00300
Lysine biosynthesis
metd00470
D-Amino acid metabolism
metd01100
Metabolic pathways
metd01110
Biosynthesis of secondary metabolites
metd01120
Microbial metabolism in diverse environments
metd01230
Biosynthesis of amino acids
Module
metd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
metd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C0214_18770
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C0214_18770
Enzymes [BR:
metd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
C0214_18770
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF7240
WapI
Motif
Other DBs
NCBI-ProteinID:
AWI90120
LinkDB
All DBs
Position
complement(3973765..3975051)
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AA seq
428 aa
AA seq
DB search
MTDAPDLAAALIAENFSRDGGGILHVGGLPLTDLAEEFGTPLFVYDAGVMRRTYRALRTA
LAGFAEIDYSVKANPSPAVIRVFHEEGAGAEIASGAEFAAALEAGVPPEKILFAGPGKGA
ADLDRVVAGGIGEIHLENCEEILRVAAAAERHGVTVRVALRINPGAAAQGGAMRMGGKPS
PFGFDEEEMEAAIDAVEAQGLLRLVGLHLFAGTQGLKAETLLGQWAYGLGLAARIAGRTG
RPLETIDLGGGLGIPYFSGDAALDLGMLRAGMPDLIATLRADPSLAGARVVLEPGRYLAG
PAGLYVARVLAVKESRGSRFVITDGGMHHHLAASGNLGQIVKRDFPLAAVTETGAARAAT
AVVGPLCTPLDMLARAAPLPPLAEGDLVAVLQSGAYGLTASPTGFLSHPMPAELLVDRGA
ATVIRPSE
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgctcccgacctcgccgccgcgctgatcgccgagaatttttcgcgcgatggg
ggcggcattctccatgtcggcggcctgccgctgaccgatctcgccgaggagttcggcacg
ccgctcttcgtctacgatgccggggtgatgcgccggacctaccgggcgttgcggacggct
ttggccggcttcgccgaaatcgactactccgtgaaggcgaacccgagcccggccgtcatc
cgcgtcttccacgaggagggggcgggcgccgagatcgcctccggcgccgagttcgcggca
gccctcgaggccggcgtcccgcccgaaaagatcctgttcgcggggccgggcaagggcgcg
gccgacctcgaccgggtggtcgccggcggcatcggcgagatccacctcgaaaactgcgag
gagattctccgcgtcgcggcggcggcggagcgccacggtgtcaccgtgcgggttgccctg
cggatcaatcccggtgccgccgcccagggcggggcgatgcggatgggcggcaagccctcg
cccttcggcttcgacgaggaggagatggaggccgccatcgatgcggtggaggcgcaaggc
ctacttcgcctcgtcgggcttcatctcttcgcgggcacgcaggggctgaaggccgagacc
ctgctcggtcagtgggcctacggcctcggcctcgccgcgcggatcgcaggacgaaccggg
cgcccgttggagacgatcgacctcggcggcggtctcggcatcccgtatttttccggcgac
gccgccctcgacctcggcatgctccgcgccgggatgcccgacctgatcgcgacgctgcgg
gccgacccgtcgttggcgggggcccgcgtggttctggagcccggccgctacctcgccggt
ccggcggggctctacgtggcgcgggtgctggcggtgaaggaatcccgcggcagccgcttc
gtcatcaccgacggcggcatgcatcaccacctcgccgcgagcggcaatctcggccagatc
gtcaagcgcgacttccccctggcggccgtgacggagacgggcgccgcgcgcgcggcgacg
gccgtggtcggcccgctgtgtacgccgctcgacatgctggcccgcgccgctcccctgccg
ccgctcgccgagggcgacctcgtcgccgtgctgcaatcgggcgcctacgggctgaccgcg
agtcccaccggcttcctgagccatccgatgccggccgaactgctggtcgacaggggagcg
gcaacggtgatccggccgtccgaatga
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