Methylobacterium sp. DM1: C0214_22265
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Entry
C0214_22265 CDS
T05461
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
metd
Methylobacterium sp. DM1
Pathway
metd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
metd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C0214_22265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metd03400
]
C0214_22265
Enzymes [BR:
metd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
C0214_22265
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
C0214_22265
DNA repair and recombination proteins [BR:
metd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C0214_22265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AWI90701
LinkDB
All DBs
Position
4695965..4696864
Genome browser
AA seq
299 aa
AA seq
DB search
MPELPEVETVRRGLAPAMVGARFSRVILRRPNLRFPFPERFAERLEGATVRDLARRAKYL
TAHLDSGESLILHLGMSGRFDVRMPDGSNLSPGDFYLEGALGQPKHDHVVMAFANGATVT
YNDTRRFGFMDLVATRDLDTCRHFAGMGVEPLSDALDAALLARLFARKITPLKAALLDQR
LIAGLGNIYVCEALHRSGLHPALPAGALTKPDGSPAPKAKKLVKEIKAVLTEAVAAGGST
LRDYARPDGERGAFQHGFRVYDRVGHACPTRGCTGRIGRIVQGGRSTFFCETCQKLPLR
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcccgaagtcgagaccgtgcgccggggcctcgcgcccgccatggtcggc
gcgcgcttctcccgcgtcatcctgcgccggccgaacctgcgcttccccttccccgagcgc
ttcgccgagcggctggagggcgccaccgtgcgcgacctcgcgcgccgggccaaatacctc
accgcgcatctcgattccggcgagagcctgatcctgcatctcggcatgagcgggcgcttc
gacgtgcggatgcccgacggctcgaacctctcgccgggcgacttctacctcgaaggggcg
ctgggccagcccaagcacgaccacgtggtgatggctttcgccaacggcgccacggtgacc
tacaacgacacccgccgcttcggcttcatggacctcgtggcgacgcgcgatctcgacacc
tgccgccacttcgccggcatgggcgtcgagccgctctcggacgccctcgacgcggccctg
ctcgcgcggctgttcgcgagaaagatcacgccgctgaaggcggcactgctcgaccagcgc
ctgattgcgggcctgggcaacatctatgtctgcgaggcgctgcaccgctcggggctccac
ccggccctgccggcgggcgcgctgaccaagcccgacggctcgccggcaccgaaggcgaaa
aagctcgtcaaggagatcaaggcggtgctgaccgaggcggtggccgccggcggctcgacc
ctgcgtgactacgcccggccggacggggagcgcggcgccttccagcacgggttccgcgtc
tacgaccgggtgggccatgcctgcccgacccggggctgcaccggccggatcggccggatc
gtgcagggcgggcgttcgaccttcttctgcgagacctgccaaaaactgccgctccgataa
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