Methanothermobacter sp. EMTCatA1: tca_00193
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Entry
tca_00193 CDS
T05328
Symbol
exoA
Name
(GenBank) Exodeoxyribonuclease
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
mete
Methanothermobacter sp. EMTCatA1
Pathway
mete03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mete00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
tca_00193 (exoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mete03400
]
tca_00193 (exoA)
Enzymes [BR:
mete01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
tca_00193 (exoA)
DNA repair and recombination proteins [BR:
mete03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
tca_00193 (exoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
BAZ98268
LinkDB
All DBs
Position
complement(152523..153296)
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AA seq
257 aa
AA seq
DB search
MTVLKIICWNVNGLRAVHRKGFLKWFMEEKPDILCLQEIKAAPEQLPRKLRHVEGYRSFF
TPAERKGYSGVAMYTKVPLSSLREGFGVERFDTEGRIQIADFDDFLLYNIYFPNGKMSEE
RLKYKLEFYDAFLEDVNRERDSGRNVIICGDFNTAHREIDLARPKENSNVSGFLPVERAW
IDKFIENGYVDTFRMFNSDPGQYTWWSYRTRARERNVGWRLDYFFVNEEFKGKVKRSWIL
SDVMGSDHCPIGLKIEL
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgctaaaaataatatgctggaacgtcaacggcctcagggcggtccacaggaag
gggttccttaaatggttcatggaagagaagccagacatcctgtgccttcaggagataaaa
gcagcgcctgaacagcttcccaggaagctcaggcacgttgagggttacagaagcttcttc
acccctgcggagagaaaggggtacagcggggttgccatgtacacaaaagtacccctatct
tcactgagggagggtttcggtgtggagagattcgacaccgagggtcggatacagatcgca
gactttgacgacttcctcctctacaacatatacttccccaacggtaagatgtcagaggag
aggctgaagtataaactggaattctatgacgcattccttgaggacgtcaaccgggagagg
gattcgggaaggaacgtgattatatgcggggacttcaacacagcccacagggagatagac
cttgcaaggccaaaggaaaacagcaacgtatcaggtttccttcctgttgagagggcctgg
atcgacaaatttattgaaaatgggtacgtggacaccttcaggatgttcaacagtgacccc
ggacagtacacatggtggagctacaggacaagggcccgtgagaggaatgtcggctggaga
ctcgactacttctttgtaaacgaggagttcaaagggaaggttaaaaggtcctggatactc
tcagatgtcatgggctcagaccactgccccataggactgaaaatagaactataa
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