Methanothermobacter sp. EMTCatA1: tca_00435
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Entry
tca_00435 CDS
T05328
Symbol
uvrD1
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mete
Methanothermobacter sp. EMTCatA1
Pathway
mete03420
Nucleotide excision repair
mete03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mete00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
tca_00435 (uvrD1)
03430 Mismatch repair
tca_00435 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mete03400
]
tca_00435 (uvrD1)
Enzymes [BR:
mete01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
tca_00435 (uvrD1)
DNA repair and recombination proteins [BR:
mete03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
tca_00435 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
tca_00435 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
Cas_Cas4
AAA_11
AAA_12
ResIII
D123
Motif
Other DBs
NCBI-ProteinID:
BAZ98510
UniProt:
A0A223ZEN6
LinkDB
All DBs
Position
complement(395691..398441)
Genome browser
AA seq
916 aa
AA seq
DB search
MTGSLCRKGEACTEKQKMAVKKTEGPLVVVAGPGAGKTRVLVERVAYLVKRKGVSPENIL
VITFTEKAAGELKARLINCVGLDAELMQISTIHSFCSKVLSDHPEEHEFGAGFEILDEES
QLIFLRTVFYKIGLDRYMKMGEVHRAIEFFNRCTENCIEPEELIDALGRKYPDREEYQGI
AGCYTRYLELLREQKKIDFPGLEKEVYLLLNSSERVLESVRKRYRRIMIDEYQDTSPIQE
LILREIAGKNSSICVVGDEDQSIYGFRGATPENFIRFREEYDAEVVTLEDNFRSRAGIVL
TADSFMRGERHYEKTIKPVRDGGTDVVILKNRDVNSEARNIVSLIKKLKSSGKIPEYGYV
ALLFRSVRNHADKVLAELRREGIPYIVRGDGSFLKRYEVRSMLYFLAYVDPPDYGGRFRK
WDGWWNISRFRGEFLDLTGETLRALESLDRNCRLSDFTSRRELEKIGVHGEDAEKILGLN
RIRHEVGKGSLTVLRTFYSILEVTGYLRRLIEDGSDSSRAKIFNLAKLSSLIDRYEAIKP
GARIQDLLWYLYLLPTHLHHDEAALEDPASVKIMTVHQAKGLEFPVVFICSVINGRFPVK
RRKERDTIPIPGELLLSPGEVPDEDRRLFYVAMTRAQDALIISTAPRINTRKVGVSPFIT
DLRDKCGIYECDCTSVSRCLEREWSEEPLRINFSALFTYEECPFRYMLIYHYGFVYPETF
MQRYGIILHRCLEELHLAMKNSEEINGALIRRIVERCWIPMGRDDKVKKRRLERELLNYY
HDTRDHTGEVVSVEEPFSIPDTDIIIEGRTDLIIRTRDGELELVDFKAREHGGVERMALE
YQLRTYEYALRERYRFDSLSAYAIKDSMRISFDSDPEFRVKERIAETVARIREECFEPRK
NPFCSRCVFRTFCGAG
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgacgggttcactctgcaggaagggcgaggcatgtacagagaagcagaagatggctgtt
aagaagacggaggggccgctggtagttgtggcgggaccaggtgccgggaagacccgcgta
ctcgttgaaagggtcgcatacctcgtcaagagaaagggtgtcagcccggagaacatactc
gtcataaccttcacagagaaggcagccggtgaactgaaggcgaggctcataaactgtgtg
ggactggacgccgagctcatgcagatatccaccatacactcattctgcagcaaggtgctg
agtgaccaccccgaggaacacgaattcggggctggattcgagatcctggacgaggaatcc
cagctcattttcctcaggacggtcttctacaaaataggattggaccgctacatgaagatg
ggggaggtgcacagggccatcgaattcttcaacagatgcaccgaaaactgcattgaacct
gaagagctcatagacgccctcggaaggaaatatcctgacagggaagaataccagggcatc
gccgggtgctatacccgctaccttgaactcctcagggagcagaagaagatagacttccct
ggccttgaaaaggaggtctacctcctcctgaactccagcgagagggtactcgaatccgta
aggaagaggtacaggcgcataatgatagacgagtaccaggatacaagccccatacaggag
ttgatattaagggagatagcagggaagaactccagcatctgcgtggtgggggatgaggac
cagagcatctacggcttcaggggagccacaccagagaacttcataaggttccgtgaagag
tacgacgcagaggtggtcacccttgaggacaacttcaggtcaagggcagggatagttctg
actgcagacagcttcatgaggggcgagagacactacgagaagaccatcaaaccggtaagg
gatggcgggaccgacgttgttatactgaagaacagggacgttaactcagaggccaggaac
atagtatcactaataaagaaactgaagtcctccggcaagatacctgaatacggatacgtc
gcactcctattcaggagcgtccgcaaccacgcagataaggtccttgcagagctcaggagg
gagggcataccctacatagtgcgaggagacggctccttcctcaaaaggtatgaggtgagg
agcatgctctacttcctcgcctacgtggatccaccggactatgggggaagattcaggaag
tgggatggctggtggaacatatccagattcaggggcgaattcctggacctcaccggtgaa
accctccgggccctcgaatcccttgacaggaactgcaggctctcggacttcacatcaagg
agggaacttgagaaaatcggtgtacacggggaggatgcagagaagatccttggtctcaac
aggatacgccatgaagttgggaagggatcactgacagttctcaggacattctacagtata
cttgaggttacagggtacctcaggaggctcatagaggacgggagcgacagtagcagggct
aaaatattcaacctcgcaaagttaagttcactgatagacagatacgaggccataaagccc
ggagcaaggatacaggaccttttatggtacctctacctcctacccacccacctccaccac
gacgaggcagccctggaggacccggcgtcggtgaagatcatgacggttcaccaggcaaag
ggcctcgagttccctgttgtcttcatctgttcggtcataaacggcaggttccctgttaaa
aggcgtaaggagagggacaccatacccatacccggggaactcctgctatcacccggggag
gtacctgatgaggaccggcgcctcttctacgttgcaatgaccagggcccaggacgccctc
atcatatcaacagccccccgtatcaacaccaggaaggtgggtgtgtcaccgttcatcaca
gacctcagggataagtgcggcatctatgagtgtgactgcacatccgtcagcagatgcctt
gaaagggagtggagtgaggagcccctcaggatcaacttctcggccctcttcacctacgag
gagtgtcccttcaggtacatgctcatataccactacggcttcgtctaccctgagaccttc
atgcagcgctatgggatcatactgcacaggtgccttgaggagctccacctggccatgaag
aactcagaggagataaacggggccctcataaggagaatcgttgaaaggtgctggataccc
atggggagagacgataaggttaaaaagaggcgccttgagagggaactcctcaactactac
catgatacaagggaccatacaggggaggtggtatctgttgaggagcccttctccataccc
gacactgatataataatagaggggaggacagacctgataatcagaaccagggacggtgaa
cttgaacttgtcgacttcaaggcccgtgagcatggcggtgttgagaggatggcccttgag
taccagctccggacctatgaatacgcactaagggagaggtacaggttcgacagtctatcc
gcctacgctataaaggactccatgaggatatcctttgactccgaccctgaattcagggtt
aaggagaggatcgctgaaaccgtcgcgaggataagggaggaatgcttcgaacccaggaag
aaccccttctgcagcaggtgcgtgttcaggaccttctgtggcgcagggtga
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