Methanothermobacter sp. EMTCatA1: tca_01016
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Entry
tca_01016 CDS
T05328
Symbol
rpoC_4
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
mete
Methanothermobacter sp. EMTCatA1
Pathway
mete03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mete00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
tca_01016 (rpoC_4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mete03021
]
tca_01016 (rpoC_4)
Enzymes [BR:
mete01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
tca_01016 (rpoC_4)
Transcription machinery [BR:
mete03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
tca_01016 (rpoC_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
SLC12
Motif
Other DBs
NCBI-ProteinID:
BAZ99077
UniProt:
A0A223YXZ8
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All DBs
Position
944185..945540
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AA seq
451 aa
AA seq
DB search
MQDIIGKIEDYSSKNGILLPDPVVEYVARIADEEKLKELELQEMVRLFSRIAERNQGLDG
DELLDAVEDDYQRILKVQELVKRKRAKFPPKLIEDIAEVVRKHELSDDELDELIRRVRRA
YDRARVEAGEAVGTVAAQSVGEPGTQMTMRTFHYAGVAELNVTLGLPRLIEIVDARKKIS
TPTMSIYFEGDLRYDEEFVRRKANKIGKSTLNDVLKNFSIQYADMSVVAELDEEKIQEKH
LEYDEILAKVEKTFKKVEIDKNILRFEPPKPTIRELRLLADKVRKLQISGVKNIGKVVIR
KEDDEWVIHTEGSNLGAVLKEEGVDKVRTTTNDIHEIETVLGIEAARNAIIHEAKRTMEE
QGLTVDIRHIMLVADMMTADGSVKSIGRHGISGEKASVLARASFEETGKHLLRASIRGEV
DHLTGIIENIIIGQPIPLGTGSVSVVMKERK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggacattatagggaagatagaggattactcctcaaagaacgggatccttctcccg
gatcccgtggtggaatatgtggcccggattgccgatgaggagaagctgaaggagcttgaa
ctccaggagatggtgaggctcttcagcagaatagccgaaagaaaccagggccttgatggc
gatgaactcctggatgcggtggaggatgattaccagcggatactcaaggttcaggagctt
gtcaaaaggaagagggccaagttccccccgaaactcattgaggacatagctgaggtcgtg
aggaagcatgaactcagtgatgatgaactggatgagctcataagaagggtcaggagagcc
tatgaccgggcccgggttgaggccggtgaggccgttgggacggtggcagcccagtcagtg
ggtgaacccggtacccagatgacaatgcgtaccttccactacgcaggtgtggcagagctc
aacgttacactgggtcttccaaggctcatagagatcgttgacgcccggaagaagatatcc
acgccaaccatgagcatctacttcgagggggacctcaggtacgatgaggaattcgtgcga
aggaaggccaacaagataggtaagagcaccctgaacgatgtgcttaagaatttcagcatc
cagtacgctgacatgtcagttgttgctgaactggatgaggagaagattcaggagaagcac
cttgaatatgatgagatactggccaaggtggaaaaaacttttaagaaagtagaaatagat
aagaacatactgagatttgaacccccgaagcccaccataagggagctcaggttactcgca
gataaggtgaggaaactccagataagcggggttaaaaacataggaaaggtggttatccgt
aaagaggatgatgaatgggtaatccatactgagggttcaaaccttggagctgttcttaaa
gaagagggtgtggataaggtccgaaccacgaccaacgacatacatgagatagagacagtt
ctgggcatagaggctgccagaaacgcaataatacacgaagcaaagaggaccatggaggaa
caggggctcacagttgacataaggcacataatgctcgttgcagatatgatgaccgctgat
ggctctgtcaagtccattggaaggcacggtatcagtggtgaaaaggccagtgttcttgca
agggcttcttttgaggaaaccggtaagcaccttctgagagcaagtatcaggggcgaggtg
gaccacctcaccggtatcatagagaacattattatagggcaacctatacccctgggtaca
ggttccgttagtgttgtgatgaaagaaagaaaatag
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