KEGG   Methanothermobacter sp. EMTCatA1: tca_01272
Entry
tca_01272         CDS       T05328                                 
Name
(GenBank) hypothetical protein
  KO
K07573  exosome complex component CSL4
Organism
mete  Methanothermobacter sp. EMTCatA1
Pathway
mete03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mete00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    tca_01272
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mete03019]
    tca_01272
Messenger RNA biogenesis [BR:mete03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     tca_01272
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     tca_01272
SSDB
Motif
Pfam: ECR1_N EXOSC1 A2L_zn_ribbon Zn_ribbon_TiaS OB_RRP5_4th ECR1_N_2 HypA DmmA-like_C Zn_Tnp_IS91 Defensin_5 DUF5817
Other DBs
NCBI-ProteinID: BAZ99322
UniProt: A0A223ZFW4
LinkDB
Position
complement(1162606..1163175)
AA seq 189 aa
MKVKSGDMVFPGDFLAVSEEVLPSEGTYDEDGKIKSLVVGEVSRDDRNKSIKVISKLNTP
PTLKRGSRVIGEVIDVRGQRALVRIHSIKGNRRALATYFVGGVHVSQARKGYLSKLTDAF
RIGDIVEARVTKIMGLDGIDLQTSGRDLGVIKAMCTRCRHFMEVNGRDEVRCPNCENREK
RKLSVNYEG
NT seq 570 nt   +upstreamnt  +downstreamnt
atgaaagttaaatctggggatatggtttttcccggagattttttggctgtaagcgaagag
gtcctcccctctgaggggacctacgatgaggatggtaagataaaatcccttgtcgttgga
gaggtttcaagggatgaccggaataagagcataaaggtaatatcaaagctgaacacacca
ccaacacttaaaaggggttcaagggtcattggagaggtcattgatgtaaggggtcagcgg
gcccttgtgaggatacacagcatcaagggcaacaggagagcccttgcaacatacttcgtt
ggaggagtccacgtttcacaggcaaggaagggctacctttcaaagctaacagacgccttc
aggataggggacatcgtggaggcaagggtcacaaagatcatgggcctcgatggcatagat
ctacagacatcaggccgtgaccttggggttatcaaggcaatgtgcacccgctgcaggcac
ttcatggaagtgaacggcagggacgaggtcaggtgcccgaactgtgaaaaccgggaaaaa
aggaagctatcagtgaattatgaaggttaa

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