KEGG   Methanothermobacter sp. EMTCatA1: tca_01616
Entry
tca_01616         CDS       T05328                                 
Name
(GenBank) hypothetical protein
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
mete  Methanothermobacter sp. EMTCatA1
Pathway
mete03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mete00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    tca_01616
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mete03021]
    tca_01616
Transcription machinery [BR:mete03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     tca_01616
 Prokaryotic type
  Archaeal type
    TFE
     tca_01616
SSDB
Motif
Pfam: TFIIE_alpha Zn_Ribbon_TF HypA HTH_Cmi2_C ZnF_RZ-type Rad50_zn_hook Adenylate_cycl DUF7129 Aldolase DUF7559 DUF7560 HTH_9 Zn_ribbon_16 Sulfolobus_pRN CoiA_N Zn_ribbon_ISL3 DNA_ligase_ZBD
Other DBs
NCBI-ProteinID: BAZ99661
LinkDB
Position
complement(1500675..1501187)
AA seq 170 aa
MIDEQVLQELIHEVITEEEEEEAIPVLECLMKGKVTDEEISEKTQLKLNIVRRILYRLYD
AGVASYKRSKDPETQWYTYTWKFEPEKVTEMIKRKHSEIVRKLREALEFEENNMFFVCVN
GHYRFTFDEATEENFTCPECGSKMEFMDNSEIIQEIKDELSLMRITDSTP
NT seq 513 nt   +upstreamnt  +downstreamnt
ttgattgatgagcaggtgttacaagagttgatccatgaagttatcactgaagaagaagag
gaagaggccataccagttctggagtgcctcatgaagggcaaggtaacagatgaggagata
tcagagaaaacacagcttaaactcaacatagtcaggaggatactctacaggctctatgat
gcaggtgtggcaagttacaagaggagcaaggaccccgaaacacagtggtacacctacacc
tggaaatttgagcctgagaaggttacagagatgataaaaaggaagcacagcgagatagta
agaaagctgagggaagcccttgagtttgaggaaaacaacatgttctttgtatgtgtaaat
gggcactacagattcacctttgatgaggccacagaagaaaacttcacatgccctgaatgt
ggttcaaaaatggagttcatggataactctgaaataatacaggagataaaggacgaactc
agtctcatgagaataacggattcgactccataa

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