Methanothermobacter sp. EMTCatA1: tca_01616
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Entry
tca_01616 CDS
T05328
Name
(GenBank) hypothetical protein
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
mete
Methanothermobacter sp. EMTCatA1
Pathway
mete03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mete00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
tca_01616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mete03021
]
tca_01616
Transcription machinery [BR:
mete03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
tca_01616
Prokaryotic type
Archaeal type
TFE
tca_01616
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
Zn_Ribbon_TF
HypA
HTH_Cmi2_C
ZnF_RZ-type
Rad50_zn_hook
Adenylate_cycl
DUF7129
Aldolase
DUF7559
DUF7560
HTH_9
Zn_ribbon_16
Sulfolobus_pRN
CoiA_N
Zn_ribbon_ISL3
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
BAZ99661
LinkDB
All DBs
Position
complement(1500675..1501187)
Genome browser
AA seq
170 aa
AA seq
DB search
MIDEQVLQELIHEVITEEEEEEAIPVLECLMKGKVTDEEISEKTQLKLNIVRRILYRLYD
AGVASYKRSKDPETQWYTYTWKFEPEKVTEMIKRKHSEIVRKLREALEFEENNMFFVCVN
GHYRFTFDEATEENFTCPECGSKMEFMDNSEIIQEIKDELSLMRITDSTP
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
ttgattgatgagcaggtgttacaagagttgatccatgaagttatcactgaagaagaagag
gaagaggccataccagttctggagtgcctcatgaagggcaaggtaacagatgaggagata
tcagagaaaacacagcttaaactcaacatagtcaggaggatactctacaggctctatgat
gcaggtgtggcaagttacaagaggagcaaggaccccgaaacacagtggtacacctacacc
tggaaatttgagcctgagaaggttacagagatgataaaaaggaagcacagcgagatagta
agaaagctgagggaagcccttgagtttgaggaaaacaacatgttctttgtatgtgtaaat
gggcactacagattcacctttgatgaggccacagaagaaaacttcacatgccctgaatgt
ggttcaaaaatggagttcatggataactctgaaataatacaggagataaaggacgaactc
agtctcatgagaataacggattcgactccataa
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integrated database retrieval system