Methanothermobacter sp. EMTCatA1: tca_01641
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Entry
tca_01641 CDS
T05328
Symbol
ykoD_2
Name
(GenBank) Putative HMP/thiamine import ATP-binding protein YkoD
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
mete
Methanothermobacter sp. EMTCatA1
Brite
KEGG Orthology (KO) [BR:
mete00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mete03009
]
tca_01641 (ykoD_2)
Ribosome biogenesis [BR:
mete03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
tca_01641 (ykoD_2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
Fer4_RLI
SMC_N
Fer4
AAA
AAA_15
Fer4_7
RsgA_GTPase
AAA_24
Fer4_21
Fer4_10
Rad17
Fer4_2
AAA_23
Fer4_6
Fer4_9
PhoH
AAA_16
AAA_29
AAA_13
Fer4_16
Motif
Other DBs
NCBI-ProteinID:
BAZ99686
UniProt:
A0A223Z025
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Position
complement(1522373..1524160)
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AA seq
595 aa
AA seq
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MVIELTRISILDHDRCQPKKCNYVCIEYCPGVRMDEDTITIDEKTKKPIISEELCSGCGI
CTKRCPFNAISVINLPEALENPVHRYGQNQFELFGIPAVTSGDVVGLIGPNGIGKSTIVR
ILSGELRPNLGDFQDPPGWDEIINHFRGSQLQNYFQRLSKGEISVVHKPQMVDRIPRYVK
GKVEDLLTGIDSDRTDEVIEALEIQEIMGREISNLSGGELQSVAIAAAALREADFYYFDE
PTSWLDVRQRLNAVKVIRSLAEAGKSVMVIEHDMAALDAMSDYVHILYGKPGAYGVVSNR
RGVRVGINTYIRGFLREENVRFRKHEIEFKVKPPRVGEEGDVLAEYTALSRAYPEFKLDV
DEGTIYLNEVITAFGPNGIGKTTFAKILAGVEKPDEGKVKKKIKISYKPQYLSSDYTGTV
EEFLYANAPSYGSNLFKSEIMRPFNLEEILDKPVSGLSGGELQRLAVAVALSREADLYVL
DEPTAFLDVEQRLMAAKAIRRIIEGSNSSAMIIDHDIIFIDYVSDRAMVFSGMPGVEGHA
SAPTELREAMNTFLGEVGITFRRDKETRRPRVNKPGSFLDREQKELGEYYYLKTE
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggtgatagaattgaccagaatctcaatactcgatcatgataggtgtcagccaaagaaa
tgcaactacgtctgcatagaatactgtccaggcgtgaggatggatgaggacacaataaca
atcgacgaaaagacaaagaagcccataatatccgaggagctgtgctcgggatgcggtata
tgtacaaagagatgtcctttcaatgcaataagtgttatcaacctccctgaggcacttgaa
aaccctgtgcaccgttacgggcagaaccagtttgaactctttgggattccagcagtcacc
tccggagacgttgttggactaatagggcccaacggtatcggtaaatccaccatcgtaagg
atactgtccggggaactgcggccgaacctgggtgacttccaggacccccctggctgggac
gaaataataaaccatttcaggggttcccagctccagaattacttccagagactgagtaaa
ggagaaataagtgttgtccataagccccagatggtagacaggatcccccgctatgttaag
gggaaggttgaggatcttctaacaggtatagactcggacaggaccgatgaggtcattgaa
gccctcgagatacaggaaataatgggcagggagatttcaaacctcagtggaggggagctc
cagagtgtggccattgcagccgcggcactgagggaggcagacttctactacttcgacgaa
ccaacatcctggcttgacgttaggcagaggctcaatgcagtgaaggtaataaggtccctt
gcagaggcaggtaagtctgtcatggtgatagagcatgacatggccgccctcgatgcaatg
tcagactacgtccacatcctctacggtaaacccggtgcctacggggttgtatccaacagg
aggggtgtgcgtgtcggtatcaacacatacataaggggcttcctaagggaggagaatgtc
agattccgtaaacatgagatagaattcaaggtgaaacccccaagggtcggggaggagggt
gacgtacttgcagagtacacagccctcagcagggcataccctgaatttaaacttgatgtg
gatgagggcaccatttacctcaatgaggtgatcacggccttcggacccaacggtataggt
aaaacaaccttcgccaagatccttgcaggtgttgaaaaaccagacgaggggaaggttaaa
aagaagataaagatatcctacaagccacagtacctctcatcagactacacaggaaccgtt
gaggaatttctctatgccaacgccccatcatatggttcaaatctcttcaaaagtgagatc
atgaggcccttcaacctggaggagatacttgataaacccgtgagtgggctgagtggtggt
gagctgcagcgccttgctgttgcagttgcactctccagagaagctgatctctatgttctt
gacgagccgacagccttccttgacgttgaacagcgcctgatggctgccaaggccataagg
aggatcattgaggggagtaattcctctgcaatgatcatagaccatgatataatattcatt
gactatgtatcagacagggccatggtcttcagtggaatgccaggagtggagggacatgcg
tcagctcccacagagctcagggaggccatgaacaccttcctcggggaggtgggcataacc
ttccggagggacaaggagacgagaaggccaagggtcaacaagcctggaagtttccttgac
agggagcagaaggaacttggtgagtattactatctgaaaacagaataa
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