Methanofervidicoccus sp. A16: CFE53_00175
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Entry
CFE53_00175 CDS
T06169
Name
(GenBank) ATP-dependent helicase
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
metf
Methanofervidicoccus sp. A16
Brite
KEGG Orthology (KO) [BR:
metf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
metf03019
]
CFE53_00175
Messenger RNA biogenesis [BR:
metf03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
CFE53_00175
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5814
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AXI24673
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All DBs
Position
complement(38312..40804)
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AA seq
830 aa
AA seq
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MIIMRKLKKKKQKQELEILDIKNNVKYHCLLREVGKRIDLYRCREEKEGNIKPIQPSKVV
DILRNCDKVLLSKEDSLKLEEFLKSKNIKYELVELCPYCLIKGRYTILEEDRYLHYDRYI
CLDCAVEEVKEEVNIGKRFIETLLKRFRDVNKVLNLLTSKNPVGNPELTRYDVLTGGEED
SIRNYKVEELDIPDELKKIIKKRGIKELLPVQTLTVKGGLLKGRDLLVTSATSSGKTLIG
ELAGIKNILEGKGKFLYLVPLVALANQKYLEFRERYREIGLSVSLRVGTGRLYEGRCEDV
NTDLDSDIIVGTYEGIDYLIRSGRLKGIGTVVIDEVHSLNMEERGARLDGLIGRLRFLKR
MGEDMQMIYLSATVGNPRELSKRLGAHLITYSGRPVPLERHILFAKNEYQKLNTIREIVK
REFNVRSKYGYRGQSLIFTYSRKRAEYISRFLNSKGIKSEYYHGGMEYRRRRVVEEKFIN
QEVMCVVTTAALAAGVDFPASTVILESLAMGGDWLTPSEFQQICGRAGRKGMHDMGKVYM
LIEIGRRYHAKMERSEDEVAFQLLSSEPEDVGVIYEEKEEMEQILASLCAIEKYGRYYDS
IKRYRKRELLSKVPLMGSNYSLDYILNKLKEYGMVEERGDITVTKYGYFTGISFLYPEDA
EVIRKNLDLPILDLISLVNPFEGVYIPMGLKNRISKVINVNIPTKFIDAFEIIKENMDKI
TDRNLRDRVLPWIMEFEGMIEEDIVRYFSKYIVNLRTSGKTPLQISKHIYNTLNLQTYPG
DIYNYLENTIKVLDAIERIGSIYNRKVSKDAEYYKRKISNPYESKKYKKQ
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
ttgataataatgaggaagttgaaaaagaagaaacagaaacaagaattggagatcctcgat
attaaaaataacgttaaataccactgtctccttagggaggtaggtaagaggatagatctg
tacagatgtagggaagaaaaggaaggaaatataaaacctatacagccctccaaggtagtg
gatatcctgaggaactgtgataaggtacttctaagtaaggaggactccctaaagttggag
gagtttctaaaaagtaaaaatataaagtatgaacttgtggagttatgtccttactgtcta
ataaagggaagatacaccatactagaggaggataggtatctccactatgatagatatata
tgtctagattgtgcagttgaggaggttaaagaggaggtaaatattgggaagaggttcata
gagacgttacttaagagatttagggacgtaaataaggttttaaatctattaacatctaag
aaccctgtaggtaaccctgaattaacgagatacgatgttttaactggaggtgaagaagat
agtattagaaactacaaagttgaggagttggatatcccagatgaattaaaaaagataata
aaaaagagaggtataaaggaactactacctgtacaaacacttacagttaagggaggactg
ttgaaaggtagggatctcttagtaacctctgctacctcctctgggaagacacttataggg
gagttggcaggtataaagaacatacttgagggtaaggggaagttcctatacctggtgccc
ttagtagccctggcaaatcagaagtatttagagttcagggagcgctacagggaaatagga
ttaagtgtaagtttaagagtaggtactgggaggttatacgaggggagatgtgaggatgta
aatactgacttagatagcgatatcatcgttggaacctacgagggtatagactaccttata
agatcaggtaggttaaaaggtattggaactgttgtaatagacgaggtccactctttgaat
atggaggagaggggagcccgcttagatgggcttataggtaggttgaggtttctcaagagg
atgggggaggatatgcagatgatatacctctctgccactgtagggaatccgagggaactc
tctaaacgcttaggtgcccatcttataacctacagtggccgtccagtgcccttggagagg
catatcctatttgctaaaaacgagtatcaaaaacttaatacgatcagggagatagtaaag
agggagtttaacgtaagatctaagtacggttatagggggcagagtttgatattcacatac
tccaggaagagggcggaatacatttcaaggtttctaaactctaagggtataaagtccgag
tactaccatggaggtatggagtacaggaggaggagggttgtagaggagaagttcataaat
caggaggttatgtgtgtagttacaactgccgcccttgcggcaggggtagattttcctgcg
tcaactgtcatcttggagagtttagccatggggggcgattggctcacaccttcagagttc
cagcagatatgtgggagggcaggtaggaaggggatgcacgacatgggaaaggtgtatatg
ttgatagagataggtaggaggtatcatgcaaagatggagaggagtgaggacgaggtagca
ttccaactgttaagttctgaacctgaggatgtaggtgtaatttacgaggagaaggaggag
atggagcagatattagcaagtttatgtgccatcgagaaatatggaaggtattacgatagt
attaaaaggtatagaaagagggaactactgtctaaggttcccttgatgggaagtaattac
agtttagactatatactcaataaacttaaggagtacgggatggtggaggagaggggagat
ataactgtcactaagtacggctactttacagggatatctttcctatacccagaggatgca
gaggttataaggaagaatttagatctcccaattttagatctaatatccttagtcaatcca
tttgagggggtatatatcccaatgggccttaaaaataggataagtaaggttatcaacgtc
aatatacctacgaaatttatagacgccttcgagataataaaggagaacatggataagata
acagacaggaacctgagagatagagtactgccctggataatggagttcgaaggtatgata
gaggaggacattgtcaggtacttctctaagtatatagttaatttaaggacaagtgggaaa
acaccactgcagatatctaagcatatatacaatacattgaacctccagacctatccagga
gatatatataactacttggagaataccataaaagtacttgatgccatagagaggatagga
tctatatataacaggaaggtctctaaggacgcagaatactataagagaaaaatttctaac
ccttacgagtctaaaaaatataaaaaacaataa
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