Entry |
|
Name |
|
KO |
|
Organism |
metf Methanofervidicoccus sp. A16
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:metf00001]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CFE53_01105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:metf03009]
CFE53_01105
03016 Transfer RNA biogenesis [BR:metf03016]
CFE53_01105
03029 Mitochondrial biogenesis [BR:metf03029]
CFE53_01105
Enzymes [BR:metf01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
CFE53_01105
Ribosome biogenesis [BR:metf03009]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
CFE53_01105
Transfer RNA biogenesis [BR:metf03016]
Eukaryotic type
5'processing factors
Ribonucrease P
CFE53_01105
Mitochondrial biogenesis [BR:metf03029]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
CFE53_01105
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(246832..247536)
|
AA seq |
234 aa
MENPVDINHIFEEEGIKLLKELGWYGSIVVQYHDNYDKKIFEEVKKYGEREGLRIYTGVK
IRSESPKVLVRYVKKFRNKVDVILVEGGLLKINRQALELHDVDILSTPELNRRDSGLDHV
LARLGSVHRVAIELNFKQLLIKRNPYERARLLWAFRRNMHLAKKFDTPVVLSSGAESIYD
IKSPYDLRSFLNTLTGDPVYSKTIMEFPYKIAEYRVYLRRDNVIRYGVEVVEDE |
NT seq |
705 nt +upstreamnt +downstreamnt
gtggaaaatccagttgatataaatcatatatttgaagaggaaggtattaaactacttaag
gagttagggtggtacggttccattgtagtacaataccatgataattacgataaaaaaatt
tttgaggaggttaaaaagtacggagagagggagggtttgaggatatacacaggtgtaaag
ataagatctgaatctcctaaggtgttggtaaggtacgtaaaaaagtttaggaataaggta
gatgtgatacttgtggaagggggcctattaaagatcaacagacaggctttagaacttcac
gacgtggatatactttctacacctgagttgaacagaagggatagtggtttagatcatgtg
cttgctagactagggagtgttcatagagtagctatcgagttgaattttaaacagttgttg
ataaagagaaatccatatgagagggccaggttgttatgggcatttaggagaaatatgcac
ctggcgaaaaagtttgatactcctgtggtactctcaagtggcgctgaaagtatatacgat
ataaaatctccctacgacttaaggagttttcttaatacgttaacaggggatcctgtatat
tcaaagactattatggagtttccctataagattgcagagtacagagtgtatttgaggagg
gataacgttataagatatggagtagaggttgttgaggatgagtag |