Methanofervidicoccus sp. A16: CFE53_01335
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Entry
CFE53_01335 CDS
T06169
Symbol
rpoA2
Name
(GenBank) DNA-directed RNA polymerase subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
metf
Methanofervidicoccus sp. A16
Pathway
metf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
metf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CFE53_01335 (rpoA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
metf03021
]
CFE53_01335 (rpoA2)
Enzymes [BR:
metf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CFE53_01335 (rpoA2)
Transcription machinery [BR:
metf03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
CFE53_01335 (rpoA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
TPR_ZFYVE26
TGS
GBD_Hemicentin
Gp7_5th
Motif
Other DBs
NCBI-ProteinID:
AXI24875
LinkDB
All DBs
Position
complement(293986..295170)
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AA seq
394 aa
AA seq
DB search
MDLEKKLEKTILPPSIKKELINRITKENITDEEIVDEIISETVEAYKKTLVEPNEAVGIV
AAQSIGEPSTQMTMRTFHYAGVAELNVTLGLPRMVEIVDARKEPSTPIMTIYLTEEYRYS
REKAEEVARNIESITVEDIADDINIDLVNNCINVILNSEKMAKRDITVDDVVNAIKKKMK
LKIEVDGNILRLIIKSPSLRALSKRIPKVKSIHLKGVPNISRIIIRRDDTTGEYVLYSQG
SNLREVFKVEGVDTTRTITNNIIEIQEVLGIEAARNAIINEMSDTLSQQGLTVDIRHLML
VADIMTVDGMVKPIGRHGISGEKASVLARAAFEETVKHLYTAAQRGEVDKLNGVIENIIV
GKPVSVGTGCVDVYIDREYEEGKVELEKEERQKV
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggatttagaaaaaaaactagaaaaaactatattgcctccctcaataaagaaggaatta
ataaataggataactaaagaaaatattaccgatgaggaaattgtagatgagataatttct
gaaactgtagaggcgtataaaaagacacttgtagaacctaacgaggctgtaggtattgta
gccgcccaatctatcggggagccaagtactcagatgaccatgagaactttccactacgca
ggggttgcagaacttaacgttaccttaggtcttccaaggatggttgagatcgtagatgct
aggaaggaaccttcaactcctataatgactatctatttaactgaggaatacaggtacagt
agggaaaaggctgaagaggttgccaggaatattgagagtataacagttgaggatatagca
gatgatataaacatcgacttagttaacaactgtataaatgtaattttaaacagcgaaaaa
atggctaaaagggatattacagtagatgatgtggttaacgctattaaaaagaagatgaag
ttaaagatagaagtagatggaaacatactccgattaataattaaatctccttctctaagg
gcgttgagtaagaggattcctaaggttaaatctatacatctcaagggagtgccaaatatc
tcaaggataattataaggagagacgatactacaggagagtacgttttatacagtcaaggt
tctaacctaagggaagtatttaaagtggaaggtgtagatacaactaggactattacaaat
aatataatcgagatccaggaggttctaggtatagaggctgcaaggaatgctattattaac
gagatgagtgataccttaagtcagcagggtcttacagtggatatcaggcatcttatgttg
gttgctgacattatgactgtggacggtatggtgaaacctataggtagacatggtatcagt
ggagagaaggcatcagttcttgcaagggcggcattcgaggagactgtaaaacacctctac
actgcagcccagcggggagaggtggataagttaaatggtgtcatagaaaacattattgtt
ggaaaacctgtgtccgttggaactggatgtgtagatgtttatatagatagggagtatgag
gaaggtaaggtggaactggagaaggaggagaggcaaaaagtataa
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