Methanofervidicoccus sp. A16: CFE53_01580
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Entry
CFE53_01580 CDS
T06169
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
metf
Methanofervidicoccus sp. A16
Brite
KEGG Orthology (KO) [BR:
metf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
metf03016
]
CFE53_01580
Enzymes [BR:
metf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CFE53_01580
Transfer RNA biogenesis [BR:
metf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CFE53_01580
Prokaryotic type
CFE53_01580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
DUF4211
DUF4168
Motif
Other DBs
NCBI-ProteinID:
AXI25867
UniProt:
A0A510BHA6
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Position
complement(336719..337912)
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AA seq
397 aa
AA seq
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MKIRQLPEDFIVEEILDENALDEGDAFNLYLLKKINMENLRTLSYISKKFKIPLKEIGYC
GLKDRHAITIQHITIPAKYGVLSLREKNLELKYLRKVGNSLKLGQLAGNKFKITIRYLKK
EYLPDIGENLKKLHLGVPNYYDTQRFGSVYRSGEFIAKEYMMGNYEEALKIILTRYKKSE
NKLIKDLKRYIRSHWGDWRSIIRYMEDRGIRDRMFHNIIRYLEGGGEEERFKEAFKYVDI
RLKKLFVSAYQSYLWNESVKSLLKKYIPKEDRTYMDYNCGTFLFYKDIEEDVLNTLKDET
FPTITHDLDTKDVKEEYWKIIEDILKKEGLRIEDFNRLLDLSKPSYTERRILSIPEEIRY
GEFLEDELNKGRYKITVEFQLKKGCYATMIVKRITSI
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatcagacaacttccagaggattttattgtggaggagatactagacgagaatgcc
cttgatgagggagatgcctttaatctctatttattaaaaaagataaatatggaaaattta
aggacgttgtcctatatatccaaaaaattcaagattcctctaaaggagataggttactgt
ggtttaaaggatagacacgctattacaatccaacatattaccatccctgcaaaatatgga
gtgttatctctaagggagaagaatctggagttgaaatatctaaggaaagtaggaaattct
ctaaagttaggacagttggcaggaaataaatttaagattaccatcagatatctcaaaaaa
gaataccttcccgatataggggagaatctgaaaaaactacatttgggagtacctaactat
tatgacactcagagatttggaagtgtatatagaagcggggaattcatagccaaggagtat
atgatggggaactacgaagaggctcttaagataatactaacgaggtataaaaagagtgaa
aacaagttgataaaagatctaaaaagatacataaggagtcattggggggattggaggtct
attatcaggtatatggaggatagaggaataagggatcgaatgtttcacaacataattagg
tatcttgaaggtggaggagaggaagagagattcaaggaagcctttaagtacgtagatatt
aggttgaagaagttgttcgtctctgcttatcagagttatctctggaatgaatctgtaaag
agtcttttaaagaaatatattcctaaagaggatagaacatacatggattataactgtgga
acctttttattctataaagatatagaagaggacgttcttaatactttgaaagatgaaacc
tttcccactataacccatgatctagacacaaaggatgttaaggaggagtactggaagatc
atagaggatattttaaagaaagagggattaagaatagaggacttcaacagacttctagat
ctctcaaaaccctcctatactgaaagaaggatactctccatccctgaggagataagatac
ggagaatttttagaggatgaattaaataaaggtagatataagatcaccgtggagtttcaa
ctgaagaagggctgttatgctactatgatagtaaagagaataacatccatttaa
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