Methanofervidicoccus sp. A16: CFE53_01980
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Entry
CFE53_01980 CDS
T06169
Name
(GenBank) Pre-mRNA processing ribonucleoprotein
KO
K14564
nucleolar protein 56
Organism
metf
Methanofervidicoccus sp. A16
Pathway
metf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
metf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CFE53_01980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
metf03009
]
CFE53_01980
Ribosome biogenesis [BR:
metf03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
CFE53_01980
Prokaryotic type
CFE53_01980
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Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Nop5_N
EFTUD2
XFP
PH_NDK7_N
Tra1_central
Nop5_56-rel_N_Arc
Motif
Other DBs
NCBI-ProteinID:
AXI24986
LinkDB
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Position
422091..423335
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AA seq
414 aa
AA seq
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MYYLIFTSYGAFLLDYNGDLSLENIKYYKIFPEEDIPKIMYDLRRGNLQIVDKLKEEWNL
KDGEKVIVEYLEEEPTTPGKFVRENVYTLGKRYGVFNSYEEFIEKTNLWTTELTKLLMKE
ASERKDKLIIQTVSALDDLDETLNLFSERLREWYSLYFPEMDKIIKKHELYAKLVSQFLK
RENYTRTKLKEFLPSKTAKILSKAAKSSMGAELSERDLSIIKEFADQIISLYNLRDKLVK
YLEELMEETAPNLTKLAGPSLGARLISLTGGLERLSKLPASTIQVIGAEKALFAHLRLGA
DPPKHGVIFQHPLIQSSPWWIRGKVARALACKLAVGVRADVFGNYIADELLEALNKRVEE
IKRKYPEPRKKTSKKRKEKKEKGKKKKKEDKKKKKKGKKSKKGKKVIGKTSSKW
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtactatctgatattcacatcttacggtgcctttctcctagattataatggagatcta
agtttggaaaacataaaatactataagatattcccggaagaggatatacctaagattatg
tacgaccttagaaggggaaatctacagatagttgataagttgaaggaggagtggaatcta
aaagacggtgaaaaggttatagtagagtatttagaggaggagcctacaactccagggaaa
ttcgtaagagagaacgtctacactctcggtaagaggtacggcgtctttaacagttatgag
gagtttatagaaaaaactaacctctggacaactgaactcactaaactcctgatgaaggaa
gcctctgagagaaaggataaattaataatccaaacagtaagtgcactagatgacttagat
gagacacttaatctattctccgagagacttagggagtggtactccctctacttcccagag
atggacaaaattataaagaaacatgaactctatgcaaagttagtatctcagtttttaaag
agggaaaattataccaggactaagttaaaggagtttttaccttcaaaaacagctaaaatt
ctatctaaagcggcaaagagttcaatgggtgcagagttatctgagagggatctttccatt
ataaaagagtttgcagatcagataatatctctttacaacttaagagataaattagtgaag
tatctggaagaactgatggaggagactgcacctaacttaacaaagttggcaggaccttcc
ctaggtgcaagacttataagtttaactggaggattggagagactgtcaaaactacctgcc
tctacaatacaggttatcggtgctgagaaggcactgtttgcacatctgagattaggtgca
gatcctccaaaacatggggttatatttcaacaccctcttattcaaagttctccctggtgg
atcaggggaaaggttgcaagggcccttgcctgtaagttggcggtaggagttagggcagat
gtatttggaaactacatagcagatgaacttcttgaagcccttaataagagggttgaggag
ataaagaggaagtatcctgaaccgaggaagaaaacttcaaagaaaagaaaagaaaaaaaa
gaaaaaggtaagaaaaagaaaaaagaagataaaaagaaaaagaaaaaaggtaaaaaatcg
aagaagggaaagaaggtaataggaaagacatcctcaaaatggtga
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