Methanofervidicoccus sp. A16: CFE53_02355
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Entry
CFE53_02355 CDS
T06169
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
metf
Methanofervidicoccus sp. A16
Pathway
metf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
metf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CFE53_02355 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
metf03021
]
CFE53_02355 (tfb)
Transcription machinery [BR:
metf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
CFE53_02355 (tfb)
Prokaryotic type
Archaeal type
TFB
CFE53_02355 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Lar_restr_allev
Sigma70_r4
UPF0253
RPA_interact_C
HTH_AsnC-type
BRF2-like_C_cyclin_rpt
ORC6_2nd
RH_dom
Vps36-NZF-N
Zn_ribbon_Elf1
Motif
Other DBs
NCBI-ProteinID:
AXI25058
UniProt:
A0A510BBG6
LinkDB
All DBs
Position
500254..501252
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AA seq
332 aa
AA seq
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MKMETVEKEGVVEKEKNKEKKESKNVILEKEEELVCPICNSKNIIKDYERAEIVCADCGC
VLQQNLFDTGPEWRAFDHEQRVKRSRVGAPITYTIHDKGLSTVIDWRNKDSYGKDISAER
RAQLYRLRKWQRRIRVSDASERNLAYALSELDRIASKLGLPRNVRENAAILYRGAVEKGL
IRGRSIEGVAAAALYAACRICKVPRTLDEIAEVSRVDRKEIGRTYRFLTRELNIKLAPTS
PIDYVPRFASELNLPGEVESKAIAILQKASEKGLTSGRGPTGVAAAAIYIASVLHGTRRT
QREVADVAGVTEVTIRNRYKELTEHLDIDVTL
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggagactgtagaaaaagagggtgtcgtagaaaaagaaaaaaataaagaaaaa
aaagaatcaaaaaatgttattcttgaaaaggaggaggagttagtctgtcctatatgtaat
agtaaaaatataattaaagattacgagagagcagaaattgtatgtgcagactgtggttgt
gtcttacagcagaatctatttgatacaggaccagagtggagggccttcgaccatgagcag
agggtaaagagaagtagggtaggggctccaataacatacactattcatgataagggatta
tctacagttatcgactggaggaataaagacagttatggtaaagatatctctgcagagagg
agggctcaactctacaggttgagaaagtggcagagaagaattagagtatcagatgcctcg
gagagaaatctggcctatgctctttcagagttagatagaattgcatctaagttaggactt
ccaaggaatgtaagagagaatgctgcaatcctctatagaggtgctgtagagaagggactt
attagaggtagaagtatagaaggtgtagcagcagccgccctctacgccgcctgtagaata
tgtaaggttccaaggacattagatgaaattgctgaagtctccagagtagatagaaaggag
ataggtagaacctacaggttcctaacaagggagttgaatataaagttggctccaacaagt
ccaatagattacgtcccaagatttgcctctgaacttaatctacctggagaggtggagtct
aaggctattgccatccttcagaaggcaagtgagaaggggttaacaagtggtagaggccca
acaggtgtagctgcagctgcaatatacatcgccagcgtactccatggaacaagaagaacc
cagagagaggttgctgatgttgcaggtgttacagaggttactataagaaatagatacaag
gagttgacagaacacttggacatagatgtaactctttaa
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