Methanofervidicoccus sp. A16: CFE53_04005
Help
Entry
CFE53_04005 CDS
T06169
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
metf
Methanofervidicoccus sp. A16
Brite
KEGG Orthology (KO) [BR:
metf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
metf03016
]
CFE53_04005 (endA)
Enzymes [BR:
metf01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
CFE53_04005 (endA)
Transfer RNA biogenesis [BR:
metf03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
CFE53_04005 (endA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Sen15
ATG19
CR4_N
Motif
Other DBs
NCBI-ProteinID:
AXI25347
LinkDB
All DBs
Position
845640..846161
Genome browser
AA seq
173 aa
AA seq
DB search
MAKKPVVGVLSGDRIVVFSKEGMSRLSAKRYGELNENFLSLSLIEGLYLLSKNWIKVKFK
DRFLSFEELYNYAKEIDERLCIKYLVYRDLKNRGYTVKTGLKYGADFRLYSRENIDEVHS
EYLVKVFSEDRPCSISELTGFVRVAHSVRKKLIIAIVDNDGDIVYYNMEYIRP
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaaacctgtagtaggggtactctctggagataggatagtggtatttagtaaa
gagggtatgtcccggttaagtgccaagaggtacggagagttaaacgagaactttctatca
ctatctctaatagaggggctctatctactgtcgaagaactggataaaggttaaatttaag
gataggtttctatcctttgaggaactttacaactacgctaaagaaatagatgaaagactg
tgtataaagtatctggtgtatagggatctgaaaaatagaggttatacagtaaaaactgga
cttaagtacggggctgattttaggctctacagtagggagaacatcgatgaggtacactct
gaataccttgtaaaggtgttctccgaggatagaccttgttccatatcagaacttacaggg
tttgtaagggtcgcccactctgttagaaagaagttaataatcgccatcgtagataatgac
ggggatatcgtctactacaacatggaatatataagaccttaa
DBGET
integrated database retrieval system
