Methanofervidicoccus sp. A16: CFE53_06435
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Entry
CFE53_06435 CDS
T06169
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
metf
Methanofervidicoccus sp. A16
Brite
KEGG Orthology (KO) [BR:
metf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
metf03032
]
CFE53_06435 (topA)
03400 DNA repair and recombination proteins [BR:
metf03400
]
CFE53_06435 (topA)
Enzymes [BR:
metf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CFE53_06435 (topA)
DNA replication proteins [BR:
metf03032
]
Prokaryotic type
DNA Topoisomerases
CFE53_06435 (topA)
DNA repair and recombination proteins [BR:
metf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CFE53_06435 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
HemN_C
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
AXI25775
UniProt:
A0A510BHS5
LinkDB
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Position
complement(1415516..1417420)
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AA seq
634 aa
AA seq
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MTKLIICEKPKVAKKIGSALGKVKKRSYKGVPYYEVERKGEKIIVASAVGHLFTLEEENK
NRRFGEYPVFDVRWVPAWTVKGKEYVKKYIDTLKKLSKDVDDIYIATDWDIEGELIGYHA
LYHICGRRDAKRMRFSSLIKEEIIRAYENPDRIDSGLVDAGESRHKLDWYYGINVSRALM
QSLKAVNRWRTMSTGRVQGPALAFLVEKEWEIKNFQSRKYWVIEGILEEDIKAIHSREKF
WDEKEAKEIYSKIKDKKEGKVLKVKRRERSIKPLPPFDLGTLQREAYRIYKLSPKETQEI
AQKLYEKGYCSYPRTSSQKLPDNWKYLKNMLEKISEIEEYRKYAERILKESRKPVKGKKE
DPAHPAIHFVDVPEEPLTSKERKVYDLIVRRTLSAFWDDMRREYIEVHLDIGGELFKLSG
ARTLYNGWHEIYYFSNFEEKEIPNFREGDIVSIKKIELEEKKTKPPKRYSMSSIIKELER
RRLGTKSTRAEIVEKLIKRGYVVEEKGHLRVTNLGMAVIETLKKYCPEIVEEGMTRDMED
KLEKVQKGEMKKEDVLKMAEERLRKILQEVKSREADIGRELIKRMEEDENIENSKKCPRC
GGNLVVRRSKYGEFLGCSNYPKCRYIGNIGKKGG
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagttaataatctgcgagaaacctaaggttgcgaagaaaataggtagtgctcta
ggaaaggtaaaaaagagatcctacaagggagtaccttactacgaggtagagaggaaggga
gagaagatcatcgtagcctctgcagttggacatctctttacattggaggaagagaataaa
aataggagatttggagagtatccagtattcgatgttaggtgggtacctgcatggacggta
aagggaaaggagtacgtaaagaagtacatagacactttaaaaaaactctcaaaggatgta
gatgatatctatatagcgacagattgggatattgagggagagttgataggctatcatgcc
ctctatcacatctgtggaagaagagatgcaaagagaatgagattctccagtttaataaag
gaggagataataagggcatatgaaaacccagataggatagactctggtctcgtagatgct
ggagagagtaggcataagttagattggtactacggtatcaacgtctcaagagcccttatg
caatctctcaaggctgtaaatagatggagaacaatgagcaccggaagggttcaaggtcca
gccttagcctttttagtggagaaggagtgggaaataaagaacttccagagtagaaagtac
tgggtaatagagggaatattggaagaggatataaaggctatccatagtagggagaaattt
tgggatgaaaaagaggcaaaggagatatacagtaagataaaggataaaaaagagggtaaa
gttctaaaggtgaaaagaagggaaagaagtataaaacctcttcctcccttcgacttggga
actctacagagggaggcatataggatatataaactctctccaaaggaaacccaggagatt
gcccagaaactctacgaaaagggatactgttcctatccaagaacaagttcccagaaactt
cctgataactggaagtatctaaaaaatatgttggaaaaaataagtgaaattgaggagtac
agaaaatacgctgaaagaatacttaaagaaagtagaaagcctgttaaaggtaagaaggag
gatcctgcccatcctgcaatacactttgtagatgtacctgaggagcctctaacttctaag
gagaggaaggtctacgatcttatagttagaaggactttgagtgcattctgggacgatatg
aggagggagtatatagaggtacatctagatataggtggtgagttgtttaaactcagtggt
gccagaaccttatataatggttggcatgaaatatactacttcagcaactttgaagagaag
gagattcccaatttcagagagggagatattgtatctattaagaagatagaactagaggag
aaaaaaactaaacctcctaagagatacagcatgtcctctattattaaagagttagaaagg
aggagattgggaacaaaatctacaagggcggagattgtagaaaaacttataaagagaggt
tacgtagttgaggagaagggacatcttagggtaaccaacttaggtatggctgtaattgag
actttaaagaagtactgccccgagatagtagaggaagggatgacaagggatatggaggac
aaactggagaaagtacagaaaggagaaatgaagaaagaagatgttttaaagatggctgag
gagagattgaggaagatactccaggaagttaagagtagagaggctgatattggaagagag
ttgataaagaggatggaagaggatgaaaatatagagaactctaaaaagtgtccaaggtgt
ggagggaatcttgtagttagaaggagtaagtacggagagtttttagggtgttctaactat
ccaaaatgtaggtatattgggaatataggaaaaaaaggtgggtaa
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