Methanofervidicoccus sp. A16: CFE53_06815
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Entry
CFE53_06815 CDS
T06169
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
metf
Methanofervidicoccus sp. A16
Brite
KEGG Orthology (KO) [BR:
metf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
metf03016
]
CFE53_06815
Enzymes [BR:
metf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CFE53_06815
Transfer RNA biogenesis [BR:
metf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CFE53_06815
Prokaryotic type
CFE53_06815
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AXI25843
UniProt:
A0A510BDM6
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All DBs
Position
complement(1498920..1500227)
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AA seq
435 aa
AA seq
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MNYIIGRKRKLESLKNLKDYRKRIEKEYRKKKIRKLIEEMRVNLDKYLVNLKIEGVIKKY
PEDFIVEEITKDGIILEYGKDLGVFKDDPNWKGAFIHFTLEKVKWSTLDAIGELARRTNS
KRKNFGFAGTKDKYAATTQRVGCFGIKVEALERIKDSIKGIRIRDIQRTNKKLKLGDLWG
NRFTIKVRLKGRDPQEVVEILKNIKLDYILNYYGIQRFGTDRPITHIVGKLIYNRDFEGA
FYAYCGTPLFEEGRLREARKLVDEGDFKGALKMYPRELYYERKMLKKYLETGSFIKSFKV
LPPHLRCMFINAYQSYLFNEIINRRFQYGFEPLEGDILFDGIPTGAVLGRKCKLAEGIQG
EIEREIIEEEGIDLQKFYIEDFGDFPGTRRKLISKVYDFKFWAEEDGVVLRFKLERGCYA
TVLLREFIKDDKNIR
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaattatataataggtcgcaaaagaaagttagaatctctaaaaaatctcaaagattac
cgtaagaggatagaaaaagaatacaggaagaagaaaataagaaagttgatagaggagatg
agagttaatctagacaaataccttgtaaatttaaagattgagggagttattaagaagtac
cctgaagacttcatagttgaggagattaccaaggacggtataattttagagtatgggaaa
gatctgggggtttttaaggatgatccaaactggaaaggagcctttatacactttacactg
gagaaggtgaagtggagcaccttagatgcaataggtgagttggctaggaggacaaattca
aagaggaagaacttcggttttgcagggactaaggataagtacgcagcaactacccaacgg
gtaggatgttttggaattaaggtggaggctctggagaggataaaggacagtataaagggg
ataaggataagggatatccagaggacaaataaaaagttgaagttaggggatctctggggc
aacagatttactataaaggtaagactgaagggtagggatcctcaggaggttgtggagatc
ctgaaaaatataaagttagactatatacttaactactacggtatccagaggttcggtaca
gatagacctataacccatatagtgggaaaactaatatacaacagggactttgaaggggca
ttttatgcctactgtggaactccactgtttgaagagggcagattaagagaggcgaggaaa
cttgtagatgagggggatttcaagggagccctgaagatgtatccaagggaactctactac
gagagaaagatgctgaagaaatacttagaaacagggagttttattaagagtttcaaggtt
ctacctcctcatttaagatgtatgtttataaacgcctatcagtcctatctcttcaacgag
attataaatagaaggttccagtacggttttgagcctctagagggggacatactctttgac
ggcattcccacaggggcagtcttaggtagaaagtgtaaactggctgaaggaatacagggg
gaaattgagagggaaattatagaagaggagggtatagatcttcagaaattctatatagag
gattttggagattttcccggtaccaggagaaagttgatctccaaggtttatgacttcaaa
ttctgggcagaggaggatggtgtagttttaagatttaagttagagagaggctgctacgcc
actgtacttttaagggagtttattaaagatgacaaaaatattagataa
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