Methyloligella sp. GL2: HT051_00565
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Entry
HT051_00565 CDS
T06641
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
metg
Methyloligella sp. GL2
Brite
KEGG Orthology (KO) [BR:
metg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
metg03016
]
HT051_00565
Enzymes [BR:
metg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HT051_00565
Transfer RNA biogenesis [BR:
metg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HT051_00565
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Peripla_BP_2
Motif
Other DBs
NCBI-ProteinID:
QKP76076
UniProt:
A0A6N0DPW7
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All DBs
Position
complement(130535..131149)
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AA seq
204 aa
AA seq
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MSVELHKGDLPKGLFDGVKSVAIDSETLGLNPLRDRLCVVQLSAGDGNAHLVQFAAGQYE
APELKRLLADESVLKLFHFARFDIAVMQYYLGQMTNSIYCTKIASRLARTYTDRHGLKDL
CRELLGIEISKQQQSSDWGAAELSPEQIQYAASDVLYLHKIKEKLDAMLAREGRTELAQT
CFEFLPTRAELDLSGWYELDPFAH
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgaactgcataaaggcgatttgccgaaaggcctgttcgacggcgtcaaatcg
gtagcgatcgacagcgaaaccctcggtctgaacccgctgcgcgaccggctttgcgtggtg
cagctctccgccggcgacggcaatgcccatctggtgcagtttgccgccggccaatacgag
gcgcccgagctgaagcggcttctcgccgacgaatccgtcttgaagctgttccatttcgcc
cgcttcgacatcgccgtgatgcaatattatctcggccagatgacgaactcgatctattgc
accaagatcgcctcgcgcctggcccgcacctataccgaccgccacggattgaaggatctt
tgccgcgagctgctcggcatcgagatctccaagcagcagcaatcctccgactggggcgcc
gccgagctgtcgccggagcagatccaatatgcggcgagcgacgtgctctatctccataag
atcaaggagaagctcgacgccatgctggcgcgcgaaggccgcaccgagcttgcccagacc
tgtttcgagtttttgcccacccgcgccgagctggacctgtccggctggtacgagctcgat
cccttcgcccactag
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