| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
metg Methyloligella sp. GL2
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:metg00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HT051_07785 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:metg03021]
HT051_07785 (rpoC)
03400 DNA repair and recombination proteins [BR:metg03400]
HT051_07785 (rpoC)
Enzymes [BR:metg01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HT051_07785 (rpoC)
Transcription machinery [BR:metg03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HT051_07785 (rpoC)
DNA repair and recombination proteins [BR:metg03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HT051_07785 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1651645..1655853
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| AA seq |
1402 aa
MNQEIVNLFNPQNQQQNFDQIQIGISSPEKIYSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPTKDYECLCGKYKRMKYKGVICEKCGVEVTLAKVRRERMGHIELAAPVAHIWFLKS
LPSRIGLLLDMTLKDLERVLYFENYIVLEPGLTTLQPMQLLTEEQYIEAQDEFGEDSFTA
AIGAEAIRELLKNLDLEKTAAELREEIAETTSELKPKKLAKRLKVVEAFIQSGNRPEWMI
LTVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKRM
LQEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVG
PDLKLHQCGLPKKMALELFKPFIYSRLDAKGHASTVKQAKKLVEKEKPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPTLVEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGSPIIVPSQDIVLGLYYLSLEADNEPGEGMMFGSVAEIQHALD
AKVVTLHTKIKGRFTGVDEDGNEHTAIYDTTPGRMLLGELLPKRSATGFDLINRLLTKKD
ISHMIDVVYRHCGQKETVIFCDKIMGLGFAYACRAGISFGKDDMLIPETKEDIVSKTSDL
VLEYEAQYNDGLITRGEKYNKVVDTWTECTETVAKEMMKRISAVQIDEETGRQKPINSIY
MMSHSGARGSPAQMKQLAGMRGLMTKPSGEIIETPIISNFKEGLSVLEYFNSTHGARKGL
ADTALKTANSGYLTRRLVDVAQDCIVTETDCGTEEGITTRAVVDSGEVTVTLGARALGRT
VLDDVKDPATGEIIVKKGQLIEEEQVEAIENSNVQEIRIRSALTCETRNGICAACYGRDL
ARGTPVNMGEAVGVIAAQSIGEPGTQLTMRTFHLGGVASSKVIDQSSLEASYDGTVKIKQ
KNVVTDSQGRHMVMSRNTVLSIIDEDGNERAVHRVPYGTHLRVDDGQKVKRGERMAEWDP
YTRPLMTEIEGVVDFEDLVEGVSVSEQRDESTGITSTVIIDWRASPRGSDLRPAVVIKDK
KGEILKLPRGGEARYLLPVDGIMSVAPGSEVKGGDVLARIPMESAKTRDITGGLPRVAEL
FEARRPKDHAIIAEVSGIVEFGRDYKNKRRVTIHPDEGADPVEFLIPKGRHLSVQDGDRI
EKGEYLLDGHPAPHDILAIKGVEELANYLVNEIQEVYRLQGVTINDKHIEVIVRQMLGKM
EIQDPGDTEFLKGEQVDRLDFDDANAEAVAAGKQPATGQHVLLGITKASLQTRSFISAAS
FQETTRVLTDAAVNGKVDTLEGLKENVIVGRLIPAGTGGMLGRLKKVASHRDDLIAEERA
KVSAEQLETAGGEPEESQEESV |
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| NT seq |
4209 nt +upstreamnt +downstreamnt
atgaatcaggaaatcgtcaatctcttcaatccgcagaaccagcagcagaacttcgatcag
atccagatcgggatctcgagcccggagaaaatctactcctggtcctacggtgagattaag
aagcctgagaccatcaactaccgcaccttcaagccggagcgggacgggctgttttgcgcc
cgtatcttcggcccgaccaaggactacgagtgcctgtgcggcaagtacaagcggatgaag
tacaagggcgtcatctgcgagaagtgcggcgtggaagtgacgctcgccaaggtccggcgc
gagcgcatggggcatatcgagctggctgcgccggtggcgcatatctggttcctgaagtcg
ctgccctcgcgcatcggcttgctgctcgacatgacgctgaaggatctggagcgggttctc
tatttcgagaactacatcgttctggagccgggtctgaccaccttgcagccgatgcagctt
ctcaccgaggagcagtatatcgaggcgcaagacgaattcggcgaggacagcttcaccgct
gcgatcggcgccgaggcgatccgcgagcttctgaagaatctcgatctggagaagaccgca
gccgagcttcgcgaggagatcgccgagacgacctccgagctgaagccgaagaagctcgcc
aagcgtctgaaagtggtcgaggccttcatccagtcgggcaaccgtccggagtggatgatc
ctcaccgtggttccggtgatcccgccggagctgcgaccgctggtgccgctggatggcggc
cgcttcgcgacctcggatctgaacgatctctatcgccgcgtcatcaaccgtaacaaccgt
ctgaagcggcttatggagcttcgcgcgccggatatcatcatccggaacgagaagcgcatg
ctgcaggaggcggtcgatgcgctgttcgataatggccgccgcggccgcgtcatcaccggc
gccaataagcgtccgctgaagtcgctgtccgacatgctgaagggcaagcagggccggttc
cgtcagaacctgctcggcaagcgcgtcgactattcgggccgttcggtcatcgtggtcggc
ccggatctgaagctgcatcagtgcggcctgccgaagaagatggcgctggagctgttcaag
ccgttcatctattcgcggctcgacgccaagggccatgcctccacggtgaagcaggcgaag
aagctggtcgaaaaggagaagccggaagtctgggatatcctggacgaggtgatccgcgag
catccggtgctgctgaaccgcgcgccgacgctgcaccgtctcggcattcaggcctttgag
cccaccctggtcgaaggtaaggcgattcagttgcatccgctggtctgcgcggcgttcaac
gccgacttcgacggcgaccagatggcggtccatgtgccgctctccctggaagcgcagctc
gaggcgcgcgtgctgatgatgtcgaccaacaacatcctgcacccggccaacggctcgccg
atcatcgtgccgtcccaggatatcgtcctcggtctctactatctgtcgctcgaggcggat
aacgagccgggcgaggggatgatgttcggctcggtggccgagatccagcacgcgctggat
gccaaggtcgtcacgctgcacaccaagatcaaaggccgcttcaccggcgtggacgaggac
ggtaacgagcataccgcgatctacgacacgacgcccggacgcatgctgctcggcgagctt
ctgccgaagcgttcggcgaccggcttcgacctgatcaaccgtctgctgaccaagaaggac
atctcccacatgatcgacgtggtctatcgccactgcggtcagaaggagacggtcatcttc
tgcgacaagatcatgggtctgggcttcgcctatgcctgccgggcgggtatctccttcggc
aaggatgacatgctcattccggagaccaaggaagacatcgtcagcaagacctccgatctc
gtgctggaatacgaagcccagtacaatgacggtctgatcacccggggcgagaagtacaac
aaggtggtcgacacctggaccgagtgcaccgagacggtcgccaaggagatgatgaagcgt
atctccgcggtgcagatcgacgaggagaccggacgccagaagccgatcaactcgatctac
atgatgtctcattcgggtgcgcgtggttcgcccgcccagatgaagcagcttgccggtatg
cgcggtctgatgaccaagccgtcgggcgagatcatcgagacgccgatcatctccaacttt
aaggaggggctgtcggttctcgagtacttcaactcgacccacggtgcccgtaagggcctg
gccgacaccgcgctgaagaccgccaactccggttatctgacccggcgtctggtggacgtg
gcgcaggactgcatcgtcaccgagacggattgcgggaccgaagagggcatcaccacccgt
gcggtggtggattccggcgaggtcaccgtgacgctgggcgcccgtgcgctcggccgcacc
gtgctggacgatgtgaaggatccggccaccggcgagatcatcgtcaagaagggccagctg
atcgaagaggagcaggtcgaggcgatcgagaattcgaacgtccaggagatccgcatccgc
tcggcgctgacctgcgagacccgcaacggcatctgcgccgcgtgctacggccgcgacctg
gcccgcggtacgccggtcaatatgggcgaggcggtcggcgttatcgccgctcagtccatc
ggcgagccgggcacccagctcaccatgcgtaccttccacttgggcggtgtggcgagctcg
aaggtcatcgaccagtcctcgcttgaggccagctatgacggcacggtcaagatcaagcag
aagaacgtggtcaccgactcgcaagggcgccacatggtcatgagccggaacacggtcttg
tcgatcatcgacgaggacggcaacgagcgcgccgtgcaccgcgtgccttacggtacgcat
ctgcgcgtcgacgacggtcagaaggtcaagcgcggcgagcgcatggcggagtgggatcct
tatacccgcccgctgatgaccgagatcgaaggcgttgtcgacttcgaggatctggtggaa
ggcgtttcggtgtccgagcagcgggacgagtcgaccggtatcacctcgaccgtgatcatc
gactggcgtgctagccctcgcggttcggacctgcgtccggccgtggtgatcaaggacaag
aagggcgagatcctcaagctgccgcgcggcggcgaggcccgttaccttcttccggtcgac
ggcattatgtcggtcgctccgggcagcgaggtgaagggcggcgacgtgctggcccgtatc
ccgatggagagtgccaagacgcgcgacatcaccggcggtctgccgcgggtggcggagctg
ttcgaggcgcggcgtccgaaggatcacgctatcatcgccgaggtctccggtatcgtggaa
ttcggccgcgactataagaacaagcggcgggtcaccatccatcccgacgagggagcggat
ccggtggaattcctgatccccaaaggccgtcacctttcggtgcaggacggcgaccggatc
gagaagggcgaatacctgctcgacggtcatccggcaccgcacgacatccttgccattaag
ggtgtcgaggagctggccaactacctggtgaacgagatccaggaggtctaccggctgcag
ggcgtgaccatcaacgataagcatatcgaggtgatcgtccggcagatgctcggcaagatg
gagattcaggatccgggcgatacggagttcctgaagggcgagcaggtggaccggctcgat
ttcgacgatgccaatgcggaggcggtcgcggcgggcaagcagccggccaccggtcagcat
gtcctgctcggcatcaccaaggcgagcctgcagacgcgctccttcatctcggcggcctcc
ttccaggagaccacccgcgtcctcaccgacgcggcggtcaacggcaaggtcgatacgctg
gaagggctgaaggagaacgtcatcgtcggccggctgattccggcgggtaccggcggtatg
ctgggccggctgaagaaggtggccagccatcgcgacgatctgatcgccgaggagcgtgcc
aaggtttctgccgagcagctggaaaccgccggcggcgagccggaagagagtcaggaagaa
tcggtctag |
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