Methyloligella sp. GL2: HT051_08975
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Entry
HT051_08975 CDS
T06641
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
metg
Methyloligella sp. GL2
Pathway
metg03410
Base excision repair
metg03430
Mismatch repair
metg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
metg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HT051_08975 (recJ)
03430 Mismatch repair
HT051_08975 (recJ)
03440 Homologous recombination
HT051_08975 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metg03400
]
HT051_08975 (recJ)
DNA repair and recombination proteins [BR:
metg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HT051_08975 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HT051_08975 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HT051_08975 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QKP77566
LinkDB
All DBs
Position
complement(1893387..1895204)
Genome browser
AA seq
605 aa
AA seq
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MTALPRASETADEAEPLLGVARSVLGKRWVERLGPEREYLALAVAQQGGVPEILGRVLAA
RGTEPAMVADFLNPTLRALLPDPSSLQDMDKAASRFADAILAREPMAVFGDYDVDGAASL
ALVERFLRHHGQSASAYIPDRLTEGYGPSPGAMRGLAEEGASLILTVDCGISSHAAVEAA
NAAGAEVLVLDHHQAGEELPDAYAVVNPNREDDLSGQGHLAAAGVVFLFLVATLRQLRAR
GAYKDLAEPDLLSFLDLVGLATVCDVVPLKGVNRAFVTQGLKIMQQRKTPGLRALADVAR
LEAAPSSYTLGFVFGPRINAGGRTGFSGLGAKLLCTDDDVEARGLADRLEALNTERKAIE
DRMLEEAAQLAEMAVAETPDTACLVLGAADWHKGLLGLVASRITERFERPTLVIAWSADG
EGTGSARSIPGIDLGRAIRDLVDSEVLTKGGGHAMAAGFSLSQEKLEALHAALNQSFAES
YAAAMERRRLSLDGTLSASGATPELLDLLDRAGPYGPGQPKPRFAFAAHRITRLRVVGSG
HVRVSLAAPDGSRLEACAFRAAETPLGELLLASQGKPLHFAGSLRLNRWQGRETVELSIE
DAAAL
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
gtgacggcacttccacgcgccagcgagacagccgacgaagcagagccgctgctcggcgtc
gcgcgctcggtgctgggcaagcgctgggtggagcgactcggcccggagcgcgaatacctg
gcgctcgccgtcgcccagcaaggcggcgtgccggagatcttgggccgggtgctggccgcc
cgcggcaccgagccggccatggtcgccgatttcctcaaccccaccttgcgtgcgctgctg
cccgatccctcctcgctacaggatatggacaaggcggcaagccgcttcgccgatgccatc
ctcgcccgcgagccgatggcggttttcggcgattacgacgtcgacggcgccgcctcgctg
gcgctggtcgagcgattcttgcgccatcacggccaaagcgcgagcgcctatattcccgac
cggctgaccgaaggctatggcccgtcgcctggggccatgcgcggcttggccgaggagggc
gcctcgctgatcctcaccgtcgattgcggcatcagcagccatgcggccgtcgaagcggca
aatgccgccggcgccgaagtgcttgtgctggatcatcaccaggccggcgaggagctgccg
gacgcctatgccgtggtgaacccgaaccgcgaggacgatctttccggccaaggccatctc
gccgccgccggtgtggtgttcctgttcctcgtcgcaacgctgcgccagctccgcgcccgc
ggtgcctataaggacttggccgaacccgatctcctgtccttcctcgatctggtcggcctg
gccacggtctgcgatgtggtgccgctgaaaggcgtcaaccgcgccttcgttacccagggc
ctcaagatcatgcagcagcggaagacgccgggcctgcgcgcgttggccgatgtcgcccgc
ctggaagccgcgcccagctcctatacgctcggcttcgtgttcggcccgcgcatcaatgcc
ggcggccgcaccggcttctccggcctcggcgccaagctgctttgcaccgacgatgatgtc
gaggcgcgcggcctcgccgaccggctggaagccctcaacaccgagcgcaaggctatcgag
gaccgcatgctggaagaggccgcccagctcgccgagatggcggtggccgagacgcccgac
accgcctgcctggtgctgggggccgcggattggcacaagggcctgctcggcctggtggcg
agccgcatcaccgaacgcttcgagcggccgaccctggttatcgcctggagcgccgacggg
gagggcaccggctccgcccgctccattcccggcatcgatcttggccgcgccatccgcgat
ctggtcgacagcgaggtgctgaccaagggcggcggccatgccatggcggcgggcttcagc
ttaagccaagaaaagctggaggcgttgcacgccgctctgaaccagagcttcgccgaaagc
tatgccgccgcaatggagcgtcgccggctttctctcgacggcacgttgagcgcatcgggc
gcgacgccggagctcttagacctgctcgaccgggcaggaccttatggcccgggccagccg
aaaccgcgattcgccttcgccgcccacagaatcacccggcttcgcgtcgtcggcagcggc
catgtccgggtcagccttgccgcacccgacggcagccggctggaggcctgcgccttccgc
gccgccgagacgccgctcggcgagctattgcttgcatcgcaaggaaaaccgctgcatttc
gccggcagcctccgccttaatcgctggcagggccgggagacggtggagctttccatcgag
gacgcagcggccctttaa
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