Methyloligella sp. GL2: HT051_09350
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Entry
HT051_09350 CDS
T06641
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
metg
Methyloligella sp. GL2
Pathway
metg03420
Nucleotide excision repair
metg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
metg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HT051_09350
03430 Mismatch repair
HT051_09350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metg03400
]
HT051_09350
Enzymes [BR:
metg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HT051_09350
DNA repair and recombination proteins [BR:
metg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HT051_09350
MMR (mismatch excision repair)
Other MMR factors
HT051_09350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
Viral_helicase1
UvrD_C
AAA_11
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QKP77631
UniProt:
A0A6N0DUF8
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All DBs
Position
complement(1967865..1969598)
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AA seq
577 aa
AA seq
DB search
MTATAFNPTSEQAAIIGRDGHAFVRACPGAGKTRTMVERARALLADQAGHRSVAFLSFTN
AAVDELTARLAMFGALPTPIFPNFIGTFDRFLWQFFIVPFGVDGCSAAPRLVPDKKDWVV
KPPYNKARALTLDYFNRQTGALIKSKANDIGFKPKNGPGAWETIARNIIARSVQEGRVDF
DDVRAVVRKRLADKTFADRVGAALAARFREIVVDEAQDCNPADLDIIAWLRRSGLTIKII
CDPNQGIYGFRGGVTGELEAFADTFDQVDHLPMSGNFRSSPAICAAISQLRPPSSRGTPD
KALGRYKSETTPVYLLSYGGQGVSPQIGSAFQALAMNLKLRPNEAQILAATWASASNAAG
RRAVDVRNNKTLLLAQSIMRFLNAFEAGNRREALGRLHRAVLTIRGHIANLGDYGNYITE
LEVEGSDWRPDIITLGQALEPKSGEAADQWLKRARTLLDKDLVGTSTINRRLRNHASLAS
LLSTERATDLPARSIHDVKGLEFPAICVVLSPQTSGQIIGVLTGANTAQEDVENARKIYV
AASRAERLLAIATPKSRVTDLKTILNAGGGAVVVSEV
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaacggcttttaatccgacgtccgagcaggcagcgattatcggacgcgacggc
catgcgttcgtgcgggcgtgccccggagccggtaagactaggactatggtcgaaagagcc
cgggccctgctcgccgaccaggctggtcaccgaagcgtggcgtttctgtcgttcacgaat
gccgctgtcgacgagttaacagcgcgtctggcgatgttcggcgcgctgcccactccgata
ttcccaaacttcatcggaacctttgatcgctttctttggcaattcttcatcgtgcccttc
ggcgtcgatgggtgttcggcggcgcccaggttggtgccggacaagaaggactgggtcgtc
aagccgccatacaacaaagcacgagccctgaccctcgactattttaaccgtcaaacgggt
gcgctgattaagagcaaggcgaacgacatcggtttcaagccgaagaatggccctggcgca
tgggagacaatcgctcgtaacatcatagcgcgatccgttcaggaagggcgcgtggacttt
gacgatgtgcgcgccgttgttcgaaagcgattggcggacaagacgttcgctgatcgcgtc
ggcgctgcgcttgccgcccggtttcgcgagatcgtggtcgacgaggcccaggactgcaat
ccagccgacttggacatcatcgcctggcttcgacggtcaggcctgaccattaagattatc
tgcgaccccaaccagggaatttacggcttccgcggcggcgtgactggtgagctagaggcg
ttcgccgacacgttcgaccaggtcgatcaccttccgatgagcggcaactttcggtcctcg
ccggcgatctgtgccgcgatcagtcaattgcgtcccccgtcctcccggggaacgcccgac
aaggcgctcggccgctacaagagcgagactacgcctgtttacctactgtcctatggcggg
caaggcgtgtctccccagatcgggtcggcgtttcaggcactggctatgaacctcaaactt
aggccgaacgaggcgcagatcctcgcagcgacctgggctagcgcgagcaatgctgccggc
cgtcgcgccgtcgatgtacgcaacaacaagacgttgcttcttgcgcagtcgatcatgcgc
tttctgaacgccttcgaggccggtaaccgtcgtgaggcactgggacgccttcatcgcgcc
gttctgacaattcgcggtcacattgcgaatttaggagactatggcaactatatcactgag
ctcgaagtcgagggcagtgattggcgaccggatatcatcacccttggccaggcgctcgag
cctaagtctggagaggccgcggaccaatggctgaagcgtgcgcggacgctgctcgacaag
gatctggtcggaacctccacgatcaaccggcgcttgaggaaccatgcctcgctcgcgtcg
cttctgtccacagaacgagccacggacctgcccgcccgctccatccatgatgtgaaagga
ttagaatttccggctatctgcgtggtcctgtcaccgcaaacttccggccagattatcggt
gtcctgactggtgcaaacaccgcgcaagaagacgtcgagaacgcgcgcaaaatctatgtg
gcagcatcccgggcggagcgcctgctcgccattgccacgcccaagagccgcgtcaccgac
ctcaagacgatcttgaacgccggtggaggagctgtagtggtctcagaggtctga
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