Methanobacterium sp. MB1: MBMB1_0067
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Entry
MBMB1_0067 CDS
T02957
Symbol
truD
Name
(GenBank) putative tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
meth
Methanobacterium sp. MB1
Brite
KEGG Orthology (KO) [BR:
meth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meth03016
]
MBMB1_0067 (truD)
Enzymes [BR:
meth01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
MBMB1_0067 (truD)
Transfer RNA biogenesis [BR:
meth03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MBMB1_0067 (truD)
Prokaryotic type
MBMB1_0067 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
CDG64186
UniProt:
U6E9I6
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All DBs
Position
63878..65131
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AA seq
417 aa
AA seq
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MLNAETYITSQKGIGGEIRTINEDFYVEEIPETPPSGEGPNTWIWIEKNGRTTLDVVLDI
ARELKINRKQMGFAGMKDKRALTRQWICISNKTPEEIQGLEDKLHNVKIINIVPHQKKLR
MGQLIGNKFRLMVRGVGDTELAAQEATKILNELEKRGVPNYYGFQRFGKDRPNTHLVGKA
LIKGGVKDAVDRYIGHPYDTEPQHIQEARRLYDQGKLEESLESMPSGMRYEKMMLRTLIK
EKNKRGELVENSYIKALLSLPKPLSRMFVHAYQSYLFNRAVSERSKLGIDQYVEGDILID
NEEHLIHEFFPEEINQKIKNFQAHPSSPLYGSKVPLAGGKLGEMEQKILDEENLKLEDFE
VPSMPKLGSHGIRRAMRFKIWDVDAEATEEGVLLSFSIPKGCYATSVLREVMKKDVY
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacgcagaaacttacataacttctcagaaaggaattggaggcgaaatccggacc
ataaatgaagatttctacgtagaagaaatcccggaaactccacccagtggtgaaggaccc
aacacttggatctggattgaaaaaaacggcagaaccactctagatgttgttctggatatt
gcccgtgaactaaaaatcaaccgtaaacagatgggattcgccggaatgaaggataaaaga
gcccttaccagacaatggatttgtatcagtaataaaactcctgaagaaattcagggattg
gaagataaactccataatgttaaaataatcaacatagtcccccatcagaaaaaattacgt
atgggacagttgatcggaaacaagtttcgtttaatggtgcgcggtgtgggtgacactgaa
ttggcagctcaagaggcaacaaaaatccttaatgaactggaaaaaaggggagtacccaac
tattatggattccaacgtttcggtaaggataggcctaacacccacctggtgggtaaagct
ctgatcaagggaggtgttaaagatgcggtggatcgctacattggccatccctatgataca
gaacctcaacacatccaggaagcccgcagattatatgatcagggaaaactggaagaatcc
ctggaatcaatgcccagcggaatgagatatgaaaaaatgatgctacgtaccctcattaaa
gaaaaaaataaacgtggcgaattggttgagaattcttatatcaaagcattgctgagcctt
cccaaacccctcagtaggatgtttgtccatgcctatcagtcctacctgttcaaccgagca
gtcagtgaacgcagtaaactaggcattgaccaatacgtggaaggggatatcctgattgat
aatgaagaacacctgatccatgaatttttcccagaagaaattaatcaaaaaataaagaac
ttccaggcccatccttcctcacccctttatggtagtaaagtgcccttggctggcggaaag
ttgggagagatggaacagaaaattttggatgaggaaaaccttaaactagaggattttgag
gtaccgtcaatgcctaaattaggcagccatggcatacgccgggctatgaggttcaaaata
tgggatgttgatgccgaagcaactgaagaaggagtattgttaagcttttccattcccaaa
ggctgctatgctaccagtgttctgcgagaggttatgaagaaagatgtttattga
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