Methanobacterium sp. MB1: MBMB1_0183
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Entry
MBMB1_0183 CDS
T02957
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
meth
Methanobacterium sp. MB1
Pathway
meth03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
meth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MBMB1_0183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meth03400
]
MBMB1_0183
Enzymes [BR:
meth01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
MBMB1_0183
DNA repair and recombination proteins [BR:
meth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
MBMB1_0183
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
CDG64301
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All DBs
Position
183173..183958
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AA seq
261 aa
AA seq
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MRKIRILSWNVNGIRAVHRKGFKDWFMETKPDILCVQETKATVEQFPADIRHVEGYDLYT
SAAERKGYSGVATYTSLKPKKVQKGLGIPKFDSEGRTLLTDYGDFVLFNIYFPNGKMSPE
RLQYKLDFYDSFLDYADAFKEEGRNIVVCGDVNTAHKEIDLARPKENEKVSGFLPIEREW
IDRFLSHGYADTFREFNQDPDNYTWWSYRTRARDRNVGWRLDYFFVNQEFMDNVESSFIL
SDVMGSDHCPVGIDIKLDDED
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
ttgcggaaaatcagaatactttcatggaatgtaaacggaatccgggctgtgcatcgtaaa
ggatttaaagactggtttatggaaactaaacccgacatactatgtgttcaggaaacgaaa
gccactgtcgaacagtttccagccgatattaggcatgttgaaggatatgatctttatact
tctgcagctgaacgtaagggatacagtggtgttgccacctacacctccctaaaaccgaaa
aaagtacaaaagggtcttggtattcccaaatttgacagtgaaggccgcacactcctaact
gattacggagatttcgttctctttaacatttacttccccaacggaaaaatgtctcccgaa
agactccaatataaactggacttttacgactctttcctggactacgccgatgcttttaag
gaagaagggcgtaacatcgtagtttgcggggatgtgaacaccgcccacaaggaaatagac
ttagcccgccctaaagaaaacgaaaaagtgtctggattcctaccaattgaacgggaatgg
attgacagattcctcagccatggctacgcggatacattccgagaattcaaccaagaccct
gataactacacctggtggagttaccgcacccgtgcccgagacagaaatgtgggatggaga
ctggactacttctttgtaaaccaggaattcatggacaatgttgaatcttcattcatactc
tctgatgttatgggctctgatcactgtccagtgggaatagatataaaattggatgatgag
gattaa
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