Entry |
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Name |
(GenBank) DNA double-strand break repair rad50 ATPase
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KO |
K03546 | DNA repair protein SbcC/Rad50 |
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Organism |
meth Methanobacterium sp. MB1
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Brite |
KEGG Orthology (KO) [BR:meth00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:meth03400]
MBMB1_0296
DNA repair and recombination proteins [BR:meth03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MBMB1_0296
Archaeal homologous recombinant proteins
MBMB1_0296
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
complement(292502..295201)
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AA seq |
899 aa
MIIESLHMKNFKSHRDTRIDFDTGISIIIGGNGAGKSSILEAVSFALFKQYTSKKIEQLI
TTGQKKMSVEIQFTVHGRSYRVLRERTKTSSKAIMKIKEGDRFHSLISGDKQVTKEVQNL
LEMDGDLFLNAVYVRQGEIADLVEKTASEKKQMIGRLLGIDSLETAWKNMKVILDKYNEK
RIRLEGRIESFQDLEEEFKVKKEKEKELTRKIKDIDLKREENIIESNLLREKKEILDKRN
VEFENTMTLLESKKDFLHQLEKTQNDLEMQLKNIAVKEEEINRLKPQLKKLDVLKSLDEA
LKELKHLQKDKESLNKTLNDIKHFESVLNENEDYYKDYSHLDNEINSLQYARDQFEGSRV
LIQQYNERKAKLEIKVSKALEKVKDVLEKSNQTLGTSFDSFESLEEYLSQFKPQLETQIL
EVAEAIQNIKREMSNLQVKNENLKKPIDELKRVKDRCPICKSEISPQKRDELITDYSLEI
KTNQTLASDLEEKLKALEDEKRVLDLQQSKVQSINLGILKEYLKSADHDQEEINNINSSI
QELQKKVVLLENIEQDIKEKKSALASIKTNYEKYLSARGSLESLGDYEEQSIKLKEINTS
IRDLKKRISALMEIARDSVEDLPGEIAYLEKQAQRYQHLLGEVSQKDSLNSRIQENQNLI
QETREELEDLKNKITSLNYNKENHERVKREWELKNEELMKLNGQKQLMVGELNQLSPSLQ
EINDKLNSIKEYEKELVNLKDFLKLLKFIRDLFSKDGVQKDLRNLSRPLIEEKTRDLFEK
FNFEYSDIRLDEDYDVTIYGPSGKSNLDMISGGEKIAVALALRLGITQVLSGGSLELILL
DEPTIHLDAYRRQELIDLLKKMSIIPQMIIVTHDADLEDAADNILKIEKEEGVSFLVKS |
NT seq |
2700 nt +upstreamnt +downstreamnt
atgataattgaaagcctccatatgaagaactttaaatctcaccgtgatacccgtattgac
tttgacaccgggatatccataataataggcggaaatggtgcaggtaaatccagtatactg
gaagcagtgagtttcgcactctttaaacagtacaccagtaaaaaaattgaacaacttatt
accactggacagaagaaaatgtcagttgagatccagttcactgtccatggtcgaagctat
agagtactaagggaacggaccaaaaccagctccaaggctattatgaagatcaaagaagga
gataggttccattctttgatttctggagataaacaggtcaccaaggaagttcaaaatcta
ttggagatggatggggatctgttcctcaatgcagtttatgtcagacagggtgaaatagct
gatctggttgaaaaaacagcttcagaaaagaaacagatgattggaaggcttctgggaata
gattccctggaaacggcctggaaaaatatgaaagtcatcctggacaaatacaatgaaaag
agaattaggcttgaagggaggattgaatctttccaagacttagaagaagaattcaaggta
aaaaaggaaaaagaaaaagagttaacccggaagatcaaagatattgatctcaaacgagag
gagaacatcattgagtccaacttactccgggaaaagaaagaaattttggataaaaggaat
gtggaatttgaaaacaccatgactctccttgaatccaaaaaagacttccttcatcagctg
gaaaaaactcaaaatgaccttgagatgcaattaaagaatattgcagttaaagaagaagaa
attaatcgcttaaaacctcagttgaagaagttggatgttttgaaaagcctggatgaggca
cttaaagagcttaaacatttgcaaaaagataaagaaagtcttaataaaaccttgaatgac
attaagcattttgaaagtgttttaaatgagaatgaagattattacaaggattactctcat
ttagataatgaaattaacagtttacagtatgctcgggatcagtttgagggaagcagggtt
cttattcagcaatacaatgaaagaaaggctaaacttgagattaaggttagtaaagccctg
gaaaaagtgaaggatgttcttgaaaagtccaaccagactctgggcaccagttttgactct
tttgaatcccttgaagaatatttatcccagtttaaaccccagttggagacacagattttg
gaagttgctgaggctattcagaatattaaaagagaaatgtccaacttgcaggttaaaaat
gagaacctaaaaaagcccattgatgaactgaaacgtgttaaagacaggtgtccgatctgt
aaatcagagatcagtccccaaaaaagggatgaacttataacagactatagtttagaaatt
aaaaccaaccaaacactggcttcagatttagaagagaaattaaaggcccttgaagatgaa
aagagagttctggacctccagcagtcaaaagtccagagtataaatttgggaatactgaaa
gaatacttaaaatccgcagatcatgaccaagaagagattaacaatattaactccagtatt
caggaacttcaaaagaaggtagttcttctggaaaatattgaacaggacataaaggagaaa
aaatcggccctggcctccattaagacaaattatgagaaatatcttagcgctcgtggttcc
ttagagtcactcggtgattacgaagaacagtcaattaagttaaaagagattaacaccagt
atacgggacctaaaaaagaggatcagtgcccttatggaaattgccagggatagtgtggaa
gatcttccaggagaaatagcctatctggaaaaacaagcccaaagatatcagcatttactg
ggtgaagttagccagaaagattccctcaattctcggatccaggaaaatcagaaccttatc
caggaaactcgtgaagagttagaggatcttaaaaataaaattaccagtttaaattacaat
aaagagaatcatgaacgggttaaacgggaatgggagctgaaaaacgaagaattaatgaaa
ctcaatggacagaaacaattaatggtaggggaactcaatcagttatctccctcccttcag
gagataaatgataaattgaattccattaaagagtatgaaaaagaattagtaaacctcaag
gactttttaaagctgttaaaatttattcgggatcttttcagtaaagatggagttcaaaag
gatttgagaaatctttcccgaccactcatagaggaaaaaacaagagatttattcgaaaaa
ttcaacttcgagtactcggatataaggttggatgaagattatgatgtaactatctacggc
cccagtggtaaaagcaatctagacatgataagtggaggggaaaagatagccgtggctctg
gccctgcgattgggaataacacaagtactctctggagggagtttagagctcatcctgctg
gatgaacccaccattcacctggatgcttaccggagacaggaactgattgatctattgaaa
aaaatgtccatcataccccagatgatcattgttacccatgatgcagatctagaggatgcc
gctgacaacatcctgaagatagaaaaagaagaaggggtctcttttctggtgaaatcctga |