Methanobacterium sp. MB1: MBMB1_0296
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Entry
MBMB1_0296 CDS
T02957
Name
(GenBank) DNA double-strand break repair rad50 ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
meth
Methanobacterium sp. MB1
Brite
KEGG Orthology (KO) [BR:
meth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meth03400
]
MBMB1_0296
DNA repair and recombination proteins [BR:
meth03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MBMB1_0296
Archaeal homologous recombinant proteins
MBMB1_0296
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_21
AAA_27
SbcC_Walker_B
AAA_29
Rad50_zn_hook
Nuf2_DHR10-like
MukB
AAA_19
DUF1664
APG6_N
ABC_tran
Phage_Orf51
TMP_3
Motif
Other DBs
NCBI-ProteinID:
CDG64407
UniProt:
U6EB48
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All DBs
Position
complement(292502..295201)
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AA seq
899 aa
AA seq
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MIIESLHMKNFKSHRDTRIDFDTGISIIIGGNGAGKSSILEAVSFALFKQYTSKKIEQLI
TTGQKKMSVEIQFTVHGRSYRVLRERTKTSSKAIMKIKEGDRFHSLISGDKQVTKEVQNL
LEMDGDLFLNAVYVRQGEIADLVEKTASEKKQMIGRLLGIDSLETAWKNMKVILDKYNEK
RIRLEGRIESFQDLEEEFKVKKEKEKELTRKIKDIDLKREENIIESNLLREKKEILDKRN
VEFENTMTLLESKKDFLHQLEKTQNDLEMQLKNIAVKEEEINRLKPQLKKLDVLKSLDEA
LKELKHLQKDKESLNKTLNDIKHFESVLNENEDYYKDYSHLDNEINSLQYARDQFEGSRV
LIQQYNERKAKLEIKVSKALEKVKDVLEKSNQTLGTSFDSFESLEEYLSQFKPQLETQIL
EVAEAIQNIKREMSNLQVKNENLKKPIDELKRVKDRCPICKSEISPQKRDELITDYSLEI
KTNQTLASDLEEKLKALEDEKRVLDLQQSKVQSINLGILKEYLKSADHDQEEINNINSSI
QELQKKVVLLENIEQDIKEKKSALASIKTNYEKYLSARGSLESLGDYEEQSIKLKEINTS
IRDLKKRISALMEIARDSVEDLPGEIAYLEKQAQRYQHLLGEVSQKDSLNSRIQENQNLI
QETREELEDLKNKITSLNYNKENHERVKREWELKNEELMKLNGQKQLMVGELNQLSPSLQ
EINDKLNSIKEYEKELVNLKDFLKLLKFIRDLFSKDGVQKDLRNLSRPLIEEKTRDLFEK
FNFEYSDIRLDEDYDVTIYGPSGKSNLDMISGGEKIAVALALRLGITQVLSGGSLELILL
DEPTIHLDAYRRQELIDLLKKMSIIPQMIIVTHDADLEDAADNILKIEKEEGVSFLVKS
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgataattgaaagcctccatatgaagaactttaaatctcaccgtgatacccgtattgac
tttgacaccgggatatccataataataggcggaaatggtgcaggtaaatccagtatactg
gaagcagtgagtttcgcactctttaaacagtacaccagtaaaaaaattgaacaacttatt
accactggacagaagaaaatgtcagttgagatccagttcactgtccatggtcgaagctat
agagtactaagggaacggaccaaaaccagctccaaggctattatgaagatcaaagaagga
gataggttccattctttgatttctggagataaacaggtcaccaaggaagttcaaaatcta
ttggagatggatggggatctgttcctcaatgcagtttatgtcagacagggtgaaatagct
gatctggttgaaaaaacagcttcagaaaagaaacagatgattggaaggcttctgggaata
gattccctggaaacggcctggaaaaatatgaaagtcatcctggacaaatacaatgaaaag
agaattaggcttgaagggaggattgaatctttccaagacttagaagaagaattcaaggta
aaaaaggaaaaagaaaaagagttaacccggaagatcaaagatattgatctcaaacgagag
gagaacatcattgagtccaacttactccgggaaaagaaagaaattttggataaaaggaat
gtggaatttgaaaacaccatgactctccttgaatccaaaaaagacttccttcatcagctg
gaaaaaactcaaaatgaccttgagatgcaattaaagaatattgcagttaaagaagaagaa
attaatcgcttaaaacctcagttgaagaagttggatgttttgaaaagcctggatgaggca
cttaaagagcttaaacatttgcaaaaagataaagaaagtcttaataaaaccttgaatgac
attaagcattttgaaagtgttttaaatgagaatgaagattattacaaggattactctcat
ttagataatgaaattaacagtttacagtatgctcgggatcagtttgagggaagcagggtt
cttattcagcaatacaatgaaagaaaggctaaacttgagattaaggttagtaaagccctg
gaaaaagtgaaggatgttcttgaaaagtccaaccagactctgggcaccagttttgactct
tttgaatcccttgaagaatatttatcccagtttaaaccccagttggagacacagattttg
gaagttgctgaggctattcagaatattaaaagagaaatgtccaacttgcaggttaaaaat
gagaacctaaaaaagcccattgatgaactgaaacgtgttaaagacaggtgtccgatctgt
aaatcagagatcagtccccaaaaaagggatgaacttataacagactatagtttagaaatt
aaaaccaaccaaacactggcttcagatttagaagagaaattaaaggcccttgaagatgaa
aagagagttctggacctccagcagtcaaaagtccagagtataaatttgggaatactgaaa
gaatacttaaaatccgcagatcatgaccaagaagagattaacaatattaactccagtatt
caggaacttcaaaagaaggtagttcttctggaaaatattgaacaggacataaaggagaaa
aaatcggccctggcctccattaagacaaattatgagaaatatcttagcgctcgtggttcc
ttagagtcactcggtgattacgaagaacagtcaattaagttaaaagagattaacaccagt
atacgggacctaaaaaagaggatcagtgcccttatggaaattgccagggatagtgtggaa
gatcttccaggagaaatagcctatctggaaaaacaagcccaaagatatcagcatttactg
ggtgaagttagccagaaagattccctcaattctcggatccaggaaaatcagaaccttatc
caggaaactcgtgaagagttagaggatcttaaaaataaaattaccagtttaaattacaat
aaagagaatcatgaacgggttaaacgggaatgggagctgaaaaacgaagaattaatgaaa
ctcaatggacagaaacaattaatggtaggggaactcaatcagttatctccctcccttcag
gagataaatgataaattgaattccattaaagagtatgaaaaagaattagtaaacctcaag
gactttttaaagctgttaaaatttattcgggatcttttcagtaaagatggagttcaaaag
gatttgagaaatctttcccgaccactcatagaggaaaaaacaagagatttattcgaaaaa
ttcaacttcgagtactcggatataaggttggatgaagattatgatgtaactatctacggc
cccagtggtaaaagcaatctagacatgataagtggaggggaaaagatagccgtggctctg
gccctgcgattgggaataacacaagtactctctggagggagtttagagctcatcctgctg
gatgaacccaccattcacctggatgcttaccggagacaggaactgattgatctattgaaa
aaaatgtccatcataccccagatgatcattgttacccatgatgcagatctagaggatgcc
gctgacaacatcctgaagatagaaaaagaagaaggggtctcttttctggtgaaatcctga
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