Methanobacterium sp. MB1: MBMB1_0385
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Entry
MBMB1_0385 CDS
T02957
Symbol
tfb
Name
(GenBank) Transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
meth
Methanobacterium sp. MB1
Pathway
meth03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
meth00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MBMB1_0385 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meth03021
]
MBMB1_0385 (tfb)
Transcription machinery [BR:
meth03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
MBMB1_0385 (tfb)
Prokaryotic type
Archaeal type
TFB
MBMB1_0385 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
TF_Zn_Ribbon
Ribosomal_S27e
Sigma70_r4
LysW-like_globular
RPA_interact_C
Lar_restr_allev
UPF0181
HTH_Tnp_ISL3
Cyclin_C
Cas_Cas5d
A2L_zn_ribbon
YjdM_Zn_Ribbon
Elf1
Motif
Other DBs
NCBI-ProteinID:
CDG64495
UniProt:
U6EA33
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All DBs
Position
complement(383191..384213)
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AA seq
340 aa
AA seq
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MGATKTKQELVEKVPETAKEKVEVSGKEQMKQDMSEIEKIETRCPECQSEKLINDHERGE
IVCGSCGLVIDDNLVDMGPEWRAFDHEQRDKRTRVGAPITYTIHDKGLSTMIDWRNKDIY
GRDIPARNRAQWYRLRKWQRKIRISGATERNLAFALSELDRDSSRLGLPRSVREAASVVY
RNAVENKLIRGRSIEGVVAASLYAACRRCNVPRTLDEIAEVSRVSKKEVGRTYRFLTREL
NIKLPPTSPVDYVPRFASELNLSGEVQSKAIEIIEKAMEKGLTSGRGPTGVAAAALYIAS
VLLGERKTQRDVADIAGVTEVTIRNRYKELTEQLDMGVTL
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgggggcgacgaaaacgaagcaagaattagttgaaaaagttcctgaaacggctaaagag
aaagtagaagtctcaggaaaagaacagatgaagcaggatatgtctgagattgaaaaaatc
gagactagatgtcctgaatgtcaatctgagaagctcataaatgatcatgaacgaggagaa
attgtctgcggctcctgcggtctggttattgatgacaacctagtggacatgggtcctgaa
tggagggcttttgaccacgaacaaagggataaaaggacccgtgtaggtgcacctattacc
tacactatccacgacaagggtctttccaccatgatcgactggagaaacaaagatatctac
ggtcgtgacatacccgccaggaaccgagcccagtggtatcggctgcgtaaatggcaacgg
aaaatccgtatctcgggtgcaaccgagcgtaacctggcctttgccctctctgaactggac
cgtgactcctctcgattaggacttcctcgaagtgttagggaagcagcatccgtggtttac
cgtaacgcagtagaaaacaaactcatcagaggaaggagtattgagggcgtagttgccgca
tcactttatgctgcttgtcgacgttgcaatgttccccgaactttagatgaaattgccgaa
gtatcacgggtgagtaagaaagaagtgggtagaacctatcgtttccttaccagggagttg
aacatcaaattaccaccaacaagtccggtggattatgtgcctcgttttgccagtgaattg
aacctctcaggagaagtacagtccaaagctatagaaataattgaaaaagccatggaaaaa
ggtttaacctctggaagaggacctactggagttgctgcagctgccctgtacattgcctct
gtgttactgggtgagagaaaaacccagcgggatgtggcagatattgcaggagttactgaa
gttaccatccgtaaccggtacaaagaactcactgaacaattggacatgggtgttacactc
taa
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