Methanobacterium sp. MB1: MBMB1_0454
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Entry
MBMB1_0454 CDS
T02957
Name
(GenBank) transcription factor E
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
meth
Methanobacterium sp. MB1
Pathway
meth03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
meth00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MBMB1_0454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meth03021
]
MBMB1_0454
Transcription machinery [BR:
meth03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
MBMB1_0454
Prokaryotic type
Archaeal type
TFE
MBMB1_0454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
HTH_Cmi2_C
Zn_Ribbon_TF
HypA
DUF7342
TrmB
Rrf2
HTH_NPRL3
zf-UDP
HTH_5
HTH_9
Motif
Other DBs
NCBI-ProteinID:
CDG64564
UniProt:
U6ECS6
LinkDB
All DBs
Position
441861..442346
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AA seq
161 aa
AA seq
DB search
MLADPHVQEILIEVTKDDENSIPIIQCLLNGKTTDEEIAEETEIRLNIVRRILYKLYDAG
VASYKRSKDPETQWYTYNWKFEEDKIAEIISDKIEKFSNEIHQSLEYEEHNLFFVCPNGC
RYNFEEASERNFICPDCNTNMEFQDNSSIIKELKELQERMS
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcagatccccatgtgcaggaaattctcattgaggttactaaagatgatgagaat
agtattcccattattcaatgtttattgaatggtaaaaccactgatgaggaaattgctgaa
gaaactgaaatccgacttaacattgtgagaagaatactttataaattatatgatgctggt
gtggccagctacaaaagaagtaaagatcctgaaacccagtggtatacttacaactggaag
tttgaggaagataaaatcgcagaaatcatatctgataagattgaaaagttctccaatgaa
attcaccagtcactggaatatgaagaacacaacctgttttttgtctgtcccaatggttgt
cgatataattttgaagaagcctcagaaagaaacttcatatgtccagactgtaacactaac
atggaattccaggataattcatcaataattaaggaattaaaagaattacaggaaaggatg
agctaa
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